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RAFL09-10-A12

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda05323)

full reading [+] show sequence

Nucleotide sequence: RAFL09-10-A12 - full reading 
CTCTCTTCTT TTTTTCTCTC TTTCTCATAA CAACAAAAAA ACAAAAAAAA 
AACCTAATTA GTTTTTTCTT TCTGCAGAGA TTATGGAGGT ACCGGTGATT 
AATAGAATAA GAGATTTCGA AGTTGGTATA AACTCGATTA ATGATCCTTC 
GTTTCTTTCT CGATCTGTTG CTGTTTCCGG AATCGGAAAG CTACACCAAG 
CTTATGGTTT TTGGAAATGG GGAGCTTTGA TTATCGCATT TCTAGCTTAT 
TTCACCAACT TTGTTAGTAA ACTCAACAGT CTAGTTGTTA GGTTAAGAAA 
AATAGATGTC TCTGTTTCCT CTCCAACTCT TTTTGATGAT TACGATAGCG 
ATTCCGATGT TTCTTGTTCC TCTACCGTCT CCTCTGACGA TGAAAAAGAC 
GAAGAAGATG AGGCTGATGA TGAAGATGAG GATGTTGACT CGATCTTTAA 
TCGAAGACGA GTCAACGGAG GTTTCCGCGT TAGAGGATCT GATTATTACG 
ATGATGATGA TGATCAGGGA GACAATGGTA ATTGCACATG GATGGGGAGG 
CGATATAGTG GTAGTTTTGG AGATTTGTTC TCATGGCCTG ATCTTGGTGG 
GATTGGTTCG AGTGGAGTCG TGAAGCTTTG GGATCATTTA GATATCGATG 
GCGATGATCA TGAGAATGTT GTGGCAACGT TTCTCAAGAA CTATAACTCA 
ACCTCGTCAC CGTTTTTTTG GGCGGCGGAG AAAAAAGGTG TTGACGCCGT 
TAAAGTGAAG GCGTGTGATC CACGCGCCGG TTTTCGGATG CCGGCTTTGC 
TCGCGGAGTG GAGGCAGCCG GGGCGGTTGT TAGGGAATAT AATCGGAGTT 
GATACCGGTG GTGTGGAGAA AGTATACGTC AGGGATGATG TTAGCGGAGA 
GATAGCCGTG GGAGATTTGA GGAAGTTTAA CGGTGTGTTG ACGGACTTGA 
CGGAATGTGA GGCTGAGACT TGGTGGGACG CTGACGTCCT TATCTCGGGC 
TGATGGAATC CTTGACGAGA GAAAATATTG GTTGGGACGG TTTTGTCTTA 
AAGTTAAGAG GACGGACGAA AGATTCAACG CCAAAAAGAA GTGTTAAAGA 
TTAATGAGAA CGACGCAACG TTTTGTAAAT AATTTGTCTG TTTGCTTCTC 
TGCGATTTTT ATTTTAAAAT TTTAGTTTTG ATTGAATAAA AATCAGCGTC 
AGATTAATAA AAGTGTTTGT GTGTTTGGTC GGTTAC

Gene models with high sequence identity

  1. AT1G68440.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G25400.2); ...
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT1G68440.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G25400.2); Has 86 Blast hits to 86 proteins in 29 species: Archae - 0; Bacteria - 6; Metazoa - 27; Fungi - 11; Plants - 24; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL09-10-A12 introduced

  • F05834 - seed::present in fewer numbers in organism / fruit::decreased length / stem::present in greater numbers in organism / stem::abnormal
  • F17013_80 - Specific phenotypes were NOT observed.
  • F27806 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

4 mutant lines found