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Full-length cDNAs
RAFL09-17-N23

RAFL09-17-N23

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda01941)

GTTTATCGTA GTGCGTTACA AGCGTTTTAA GCTCTCACTA GCAAGCAAGT 
ACTAGCAACA ATGGCGTCAA GCACTGCGAC TATGCTCAAA GCCTCACCGG 
TGAAATCTGA TTGGGTTAAG GGACAGAGTC TTCTCCTCCG TCAACCTTCC 
TCTGTCTCAG CTATTCGCAG CCACGTGGCA CCTTCCGCTC TCACCGTCCG 
AGCCGCTTCT GCTTACGCCG ATGAGCTCGT CAAAACCGCT AAAACAATCG 
CGTCTCCGGG ACACGGAATT ATGGCGATGG ATGAGTCCAA CGCGACTTGT 
GGAAAGCGTT TGGCGTCAAT TGGGCTAGAG AACACGGAGG CTAACCGTCA 
AGCTTACAGG ACGTTGCTTG TGTCGGCTCC AGGACTTGGA CAGTACATCT 
CCGGAGCTAT CCTGTTCGAG GAGACTCTGT ACCAATCCAC CACTGATGGC 
AAGAAAATGG TTGATGTTCT CGTCGAGCAG AACATCGTCC CTGGCATCAA 
AGTCGACAAG GGTTTGGTGC CACTTGTTGG GTCTTACGAC GAGTCATGGT 
GCCAAGGACT TGACGGTTTA GCCTCTCGCA CCGCTGCTTA CTACCAACAA 
GGTGCTCGTT TCGCCAAATG GCGTACTGTT GTGAGCATTC CAAATGGACC 
CTCTGCTTTG GCTGTTAAAG AAGCAGCTTG GGGACTTGCT CGCTACGCAG 
CTATTTCTCA AGACAGCGGT CTGGTGCCGA TTGTGGAGCC AGAGATTATG 
TTGGACGGAG AACACAGCAT TGACAGGACA TACGACGTTG CAGAGAAGGT 
TTGGGCTGAG GTCTTCTTCT ACCTCGCTCA GAACAACGTC ATGTTCGAAG 
GTATTCTCCT GAAGCCAAGC ATGGTTACTC CAGGAGCTGA GGCCACAGAC 
AGAGCTACTC CTGAGCAGGT TGCTTCCTAC ACTCTCAAGC TCCTTCGCAA 
CAGAATCCCT CCTGCTGTCC CCGGAATCAT GTTCTTGTCT GGTGGACAGT 
CCGGGTTGGA GGCGACCTTG AACTTGAACG CAATGAACCA GGCACCGAAC 
CCATGGCACG TGTCCTTCTC CTACGCACGT GCCTTGCAGA ACACTTGCTT 
GAAGACATGG GGAGGCAAGG AAGAGAACGT GAAGGCGGCT CAGGACATTC 
TCTTGGCCAG AGCCAAAGCC AATTCGCTGG CTCAGCTCGG GAAATACACT 
GGAGAAGGCG AGTCTGAGGA AGCCAAGGAG GGTATGTTTG TAAAAGGCTA 
CACCTACTAA GCTATTTGTA ATAATGGTTC CATAGATCAA AACTCAAAAA 
CTTGAGCTTG ATTCTGGTCA TTTGAGTTAT TATACTCTTC TTCAGGTATG 
AAAAAAAAAA AAAAAA

Gene models with high sequence identity

AT2G21330.1 [+] show detail - fructose-bisphosphate aldolase 1
E-value: 0; Score: 99.85

InterPro Scan Digest

Program	Description	E-value
superfamily	Aldolase	1e-155
HMMPfam	Fructose-bisphosphate aldolase, class-I	2.1e-165
Gene3D	Aldolase-type TIM barrel	2.2e-141
HMMPanther	Fructose-bisphosphate aldolase, class-I	6e-263
PatternScan	Fructose-bisphosphate aldolase, class-I	0

See the detailed result >

AT2G21330.1

Model type: Protein coding
Short Description: fructose-bisphosphate aldolase 1
Computational Description: fructose-bisphosphate aldolase 1 (FBA1); FUNCTIONS IN: fructose-bisphosphate aldolase activity, catalytic activity; INVOLVED IN: response to cadmium ion, pentose-phosphate shunt; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: fructose-bisphosphate aldolase 2 (TAIR:AT4G38970.1); Has 4798 Blast hits to 4794 proteins in 909 species: Archae - 0; Bacteria - 735; Metazoa - 1150; Fungi - 8; Plants - 476; Viruses - 0; Other Eukaryotes - 2429 (source: NCBI BLink).
Link: InterPro Scan - TAIR

Mutant lines with RAFL09-17-N23 introduced

F08549 - Specific phenotypes were NOT observed.
F12232 - Specific phenotypes were NOT observed.
F15436 - Specific phenotypes were NOT observed.
F24647 - Specific phenotypes were NOT observed.
F25907 - rosette leaf::decreased size / rosette leaf::increased width / whole plant::decreased height / sporophyte vegetative stage::decreased speed / stem::present in fewer numbers in organism
F26403 - Specific phenotypes were NOT observed.
F28037 - Specific phenotypes were NOT observed.
F28409 - rosette leaf::desaturated green / rosette leaf::dark green / rosette leaf::decreased size / rosette leaf::increased width / cauline leaf::decreased size / stem::present in fewer numbers in organism / rosette leaf::desaturated green / rosette leaf::dark green / rosette leaf::decreased size / rosette leaf::increased width / cauline leaf::decreased size
F28750 - Specific phenotypes were NOT observed.
F29447 - seed::increased size / seed::increased length

Mutant lines with disrupted or induced

11 mutant lines found