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RAFL09-19-K07

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda05521)

full reading [+] show sequence

Nucleotide sequence: RAFL09-19-K07 - full reading 
AAGTAAAGAA ACAAACAAAC AAACAAAAAA CACACTTCAC TCGCTACACA 
AGGAAGAGAG ATGGCGACGT CAGGAACATA TGTGACGGAG GTTCCATTGA 
AAGGATCGGC TGAGAAACAC TACAAGCGGT GGAGGAGTGA GAACCACCTC 
TTCCCCGACG CCATCGGCCA CCACATCCAA GGTGTCACCA TCCACGACGG 
TGAATGGGAC TCCCATGGAG CCATCAAGAT TTGGAACTAC ACATGCGATG 
GGAAACCGGA GGTGTTCAAG GAGAGGAGAG AGATAGACGA TGAGAATATG 
GCGGTAACGT TCAGAGGACT CGAAGGTCAC GTGATGGAGC AGCTTAAAGT 
GTATGACGTC ATCTTTCAGT TCATTCAAAA GTCACCTGAT GATATCATCT 
GTAAGATCAC TATGATCTGG GAGAAGCAAA ACGATGACAT GCCTGAGCCC 
AGCAACTACA TGAAGTTCGT CAAGAGCCTC GCTGCTGACA TGGATGATCA 
CGTTCTCAAA GCCTAAATAT CCCTTTCACA TCAACCCATC ATCACCTAAT 
ATCATGATCA TCATCACCCT CATACGTACA TTGCTCCTTT TGTGTGTGTG 
TGTGTGTATC GTTTTTATGG TGTTTTCAAT ATAATAAATG GGGGTTTACA 
TGTATGGTTT CATCTACTAT AATATGCTTT GATGTTGTTT ATTATGGTTG 
AGGTTTCATG TATGCTCATC TACGCATGTA TCCTTGTTAA TTAATGATTT 
TCAAGAGTTA TCAAAC

Gene models with high sequence identity

  1. AT2G01520.1 [+] show detail - MLP-like protein 328
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

Program Description E-value
superfamily Bet v1-like 1.1e-36
Gene3D no description 3.1e-18
HMMPfam Bet v I allergen 7e-62

See the detailed result >

AT2G01520.1

Model type
Protein coding
Short Description
MLP-like protein 328
Computational Description
MLP-like protein 328 (MLP328); FUNCTIONS IN: copper ion binding; INVOLVED IN: response to zinc ion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT4G14060.1); Has 369 Blast hits to 340 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 369; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL09-19-K07 introduced

  • F24151 - rosette leaf::decreased size / rosette leaf::abnormal / rosette leaf::abnormal / stem::decreased thickness / whole plant::decreased height / stem::abnormal

Mutant lines with disrupted or induced

10 mutant lines found