Home
Full-length cDNAs
RAFL09-20-M23

RAFL09-20-M23

RIKEN Arabidopsis Full-length cDNAs

AAAGCCCTAA AAATCAGAGA TTCCATTTTC TCTTATCTCT CTCTCTCTCT 
TTCTCTTTTT CCGATTCTGA TTCTATTTTT TCTTCACCAA CCACACAAAA 
CAATTCTACG TTTGATCTCT TCTTCTTTCT CCGTCCAAAT TAATCTCTAC 
GTTTAATTTC TCTTGTTCAA TCATGGGACA CGAAACAATG ACGCCGGCAA 
CAACAACGCT CGTGTTCACG TACGGAACTC TAAAGAGAGG ATTCTCAAAT 
CATGTCCTGA TGCAAGATCT GATCCGATCT GGTGACGCTT CTTTCAAAGG 
TGTTTACCAA ACTCTAGACA AATATCCTCT CGTCTGTGGA CCTTACCGAG 
TCCCTTTCCT CCTCAACAAA CCTGGATCGG GCTATCACGT CAACGGCGAG 
CTTTACGCGG TTTCTCCTCG CGGTCTCTCT CGTCTCGACG AGCTCGAAGG 
AATCAGTCGC GGTCATTACA TCCGGCAACC GATACGTCTC GCGGCGGCGG 
AGGAAGAAGA AGAAGAAGAA GGAGATCTGG AAACAGAGGC GCCGTCGTCG 
TGCGTGGTGG AGGCGTATTA CGCTCATAAG AGTTATGAGG AAGAGCTGTG 
GAGGAGGAAT AGAGGAAGAT CATTCGGCGC GTACACGGAA AACGAAGCGC 
GTGGATATGT GAAACGCAAT GATAGGCCTC AGCATCTTAG CTTCTTGGAT 
CATATCCGTA TTTTCGTATC TTCTCCATGT GATTGATTTT TATTTCTTTC 
GTGGTCTCTC CCGCTCGTCG CTTTTCTATG TTTGTTTGTT TTTTTCTCGG 
GACAAAAGAA ACAAAAAAAA AAACACAAAC ACAAACTAGT TTTACAACTT 
GTAAGGGTCC CACCAGTCCG TCCGTCCGTC GTCTCCGTAT CGATTTGATT 
AGAGAGATTG TTGGGTGTAA AACTTATGAT TCCCATCTTA AATAAGTTTT 
AGGTTGTTTT TGAGTTTATG GTTAATTTTC CAGTTAAAAA C

Gene models with high sequence identity

AT3G02910.1 [+] show detail - AIG2-like (avirulence induced gene) family protein
E-value: 0; Score: 100.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	AIG2-like	0.0000000000000048
superfamily	BtrG-like (Pfam 03674)	1.5e-25
HMMPanther	TROPONIN C-AKIN-1 PROTEIN	5.1e-62
Gene3D	Butirosin biosynthesis, BtrG-like	1.3e-34

See the detailed result >

AT3G02910.1

Model type: Protein coding
Short Description: AIG2-like (avirulence induced gene) family protein
Computational Description: AIG2-like (avirulence induced gene) family protein; CONTAINS InterPro DOMAIN/s: Butirosin biosynthesis, BtrG-like (InterPro:IPR013024), AIG2-like (InterPro:IPR009288); BEST Arabidopsis thaliana protein match is: AIG2-like (avirulence induced gene) family protein (TAIR:AT5G46720.1); Has 320 Blast hits to 319 proteins in 102 species: Archae - 4; Bacteria - 64; Metazoa - 146; Fungi - 0; Plants - 79; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).
Link: InterPro Scan - TAIR

Mutant lines with RAFL09-20-M23 introduced

F04046 - Specific phenotypes were NOT observed.
F06428 - Specific phenotypes were NOT observed.
F08932 - seed::increased width
F14219 - Specific phenotypes were NOT observed.
F25929 - Specific phenotypes were NOT observed.
F28224 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

6 mutant lines found