1. Home
  2. Full-length cDNAs
  3. RAFL09-22-L12

RAFL09-22-L12

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda05659)

full reading [+] show sequence

Nucleotide sequence: RAFL09-22-L12 - full reading
ATTGCAATTT GCAAACATGG CGCTCGCGCT CTCGCTGTCG GCATGTTCTC 
CTCCACTCCG CCGCACTCGT CGTGCCGGTT TTCGAACAAG CTGCTCGATC
TTCGCGAATC CAGCACAGCG AGCCAAGAGG AAGCTGCTTG AGCTGATCTC
CGAGGAGGAT CGAGGTCTGA GAACCCAGAA AGACCCCAAG AAGCGAGATG
AAATCGTGAA CGCCATCGAA TCCATGACGG TTATCGGGCG CAGCTCCATC
ACCACAGACG ACTCTCTATC TGCCACGTGG CGGCTCTTGT GGACGACGGA
GAAGGAACAG TTGTTCATCA TAGAAAAGGC AGGCTTGTTT GGGACGACCG
CCGGAGACGT TTTGCAGGTG ATCGATGTGA ATAAACGGAT CCTCAATAAC
GTCATCACTT TCCCGCCGGA CGGGGTTTTC TTCGTACGCT CCGATATCGA
TATCGCTTCC CCGCAGAGAG TCAATTTCAG ATTCAATAGT GCGGTATTGA
GAGGGAAGAA CTGGGAGCTC CCACTGCCAC CATTTGGGAA GGGCTGGTTT
GAGAATGTGT ATATGGACGG TGAGATCAGA GTGGCCAAGG ACATCAGAGG
AGACTACTTA ATTGTTGATC GTGCTCCTTA TAACTGGACT GAATCATTTG
TATAATTTGT GATGCTTTTT GCTTCTTGTA TAAGTTATAC ACCATTTCTG
CC

Gene models with high sequence identity

  1. AT4G00030.1 [+] show detail - Plastid-lipid associated protein PAP / fibrillin family protein
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT4G00030.1

Model type
Protein coding
Short Description
Plastid-lipid associated protein PAP / fibrillin family protein
Computational Description
Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); Has 184 Blast hits to 184 proteins in 36 species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL09-22-L12 introduced

  • F13139 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

50 mutant lines found