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  3. RAFL09-33-B17

RAFL09-33-B17

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda05979)

full reading [+] show sequence

Nucleotide sequence: RAFL09-33-B17 - full reading 
ATGGGACAAT GATTGAGGCA CCTGAAGAGA ATCTTTGGTT ATCTTGTGAC 
CTTGAAGATC AAAAGGCACC ACTACCGTGT ATGGATTCTA TATATGCTGG 
TGATTTCAGT TACGATGAGA TTGGATTCCA ATTTCAAGAT GGTACCAGCG 
AACCAGATGT ATCACTAACA AATTGTTGGA GGAGGTGTTC AATAACCCTG 
ATGACTTCTC TTGCGAGGAA TCGATCAGTC GAGAGAATCC AGCAGTCTCA 
CCAAATGGGA TATTTTCATC TGCTAAAATG CTGCAGTCTG CAGCACCAGA 
GGATGCTTTC TTCAACGACT TCATGGCTTT CACTGATACA GATGCTGAGA 
TGGCGCAATT GCAGTATGGT TCAGAAGGTG GAGCTTCTGG TTGGCCAAGT 
GACACTAATT CATACTATAG TGATTTGGTT CAGCAAGAGC AAATGATCAA 
TCATAACACA GAGAACAACC TCACAGAAGG GAGAGGGATA AAGATCCGGG 
CTCGACAGCC TCAGAACCGG CAGAGTACAG GATTGATAAA CCAGGGTATT 
GCTCCAAGGA GAATCCGTCT GCAGCTGCAG TCTAACTCTG AAGTAAAAGA 
ACGAGAGGAG GTGAATGAAG GACACACTGT TATTCCCGAG GCCAAAGAAG 
CTGCAGCTAA ATACTCAGAG AAGAGTGGTT CTTTGGTTAA ACCTCAAATA 
AAGCTCAGGG TGCGGGGAAC TATAGGCCAA GTAAAAGGAG AGAGATTTGC 
AGACGACGAG GTACAGGTGC AGAGCAGAAA GAGACGAGGA GGGAAGCGAT 
GGAAGGTGGT TGCAACGGTA ATGGTGGCTG TGATGGTTGG GGTAGGGATG 
GGTATATGGA GGACACTGGT GAGTTCATGA CACATGAGAC ACAAAGAGAG 
AGAGAGAGAG AATCAAATGT AGTTTAATGT AATTAGGGAT GATGCAATGT 
TAGCATGTTT GTGTGTTGTA ACTTAAAAAC TTATTTAGGA ATCTGATAAA 
AGTTACTGTT GAAAAAAAAA AAAG

Gene models with high sequence identity

  1. AT4G35580.1 [+] show detail - NAC transcription factor-like 9
    E-value: 0; Score: 99.80

 

InterPro Scan Digest

See the detailed result >

AT4G35580.1

Model type
Protein coding
Short Description
NAC transcription factor-like 9
Computational Description
NAC transcription factor-like 9 (NTL9); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC 014 (TAIR:AT1G33060.1); Has 3027 Blast hits to 3020 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3027; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL09-33-B17 introduced

  • F17535 - Specific phenotypes were NOT observed.
  • F21637 - seed::increased size / seed::increased length
  • F21638 - seed::increased size
  • F23528 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

4 mutant lines found