1. Home
  2. Full-length cDNAs
  3. RAFL09-33-E07

RAFL09-33-E07

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda08215)

full reading [+] show sequence

Nucleotide sequence: RAFL09-33-E07 - full reading 
AATAAAGGCC AAAAATAGAG AGTTTTTCTC TGGATCACAT TATCTCTTTC 
TTTTTCTTCT TCTTCTTCCT CATGGATTCT TTAAGAACTC GAAATGTATC 
CAAAAGATCC GATCCGATCA ACTTTCCGGC GAAGTCATCC ATTTCATCCC 
GGAGATCATT ATCTTCTTCT TCTTCCTTCT CATCTTTTTC CTCCTGCTCC 
TCTAGCTCCC TTGTCTTTCC CGGCGACTCT CCTCTGAATT CTCCGGCGAC 
TCCTCTCCGT CTACTCGGTG TCCCTTTTTC ATGGGAACAA CTTCCCGGAA 
AACCTAAAGA CTACTCTCAT AGACTCAACA ACCGTCGAAA CAATGAATCT 
TCAAATCTAT TGCTACCCCT CCCTCCTCAC CGGAATATTT CCTTTCCGGC 
CACCGGAAAA AAACCTAAAC CTAACAATTC CAGTAAGAAG AACAGCTTCC 
CCGTGACCGG AAAAGATCCC TTCGCGGCTG CGTTGTTGGA ATGTTCCAAA 
GACGAAGGAA CAAACAGTGA CAACGATGAT GACGTCGACG GTGTTGAAGA 
CGTAGATCGA AGGTTTCGAG GAAACTCCGG TGGTTCAAGC AAGGTGTTGT 
CAAAGAACAG CATCGGAGAC AGGTTTGGGT TAGTAAATCT CTACGGTTCT 
TGTCGGAGAA CTTGTGCAGT AACAGAGTCC ATTGTTTATC TTCCAAGAGC 
AAGAAAAGCT GCTTCGTACG ATAATCTTCT TCCACGTCGT CGCTGTTGAT 
TTGTTCGTAT TTGGTGATTT ACTACATATT TTTGTCTTTT TTTGTGGGTT 
AAATTCTGTA TAATTTTCTC TGAATGTGAT ATATTATGGG TTTATGAGTT 
TGTGTTTTTA TTTTTCTCTC TTTAGATCGT GACATGAATG TAGTATAATT 
CCGAGACGTT GTTTACTTGT AGAAGTTGTA ACCATAAATC CATGATATAG 
CATATTCACC

Gene models with high sequence identity

  1. AT1G71970.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT1G71970.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22680.1); Has 58 Blast hits to 58 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL09-33-E07 introduced

  • F15842 - Specific phenotypes were NOT observed.
  • F18219 - seed::increased size / seed::increased length

Mutant lines with disrupted or induced

6 mutant lines found