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Full-length cDNAs
RAFL09-34-K22

RAFL09-34-K22

RIKEN Arabidopsis Full-length cDNAs

AAAACCCATT AACCATTACT GATAACCCAA CGAGATTACC TGTGAAAGTC 
TTCGTCTTCC CATCATTTTC CCTCTAATAT CCTCACTTTC TGAAGATGAG 
TTTGCTTTAA AACCACTTTG ATAAGAACAA GAAAGAAGAA GACTTTATCA 
ACCAAAATGG GTGAAGAAGC TTGTGAGGAA TCATCAAAAG CAAGCATAGA 
GAAAGCAATC GAAGCAATAT CTTCATTGAT TTCACTCTCT CACTCAATCA 
AATCCTTCAA CATCAAATGG CAACTCATAA GAACCAAACT CCAAGAGCTT 
TACTCTGGTC TCGATTCTCT CCGAAATCTC AATTCTGGAT TCGACCCATC 
TCTCTCAAGC TTAATCTCCG CCATTCTAAT CTCTCTCAAA GACACTTACG 
ATCTCGCTAC TCGCTGCGTT AACGTCTCCT TCAGTGGTAA GCTTCTGATG 
CAAAGCGATT TAGATGTTAT GGCGGGGAAA TTCGATGGAC ATACGAGGAA 
TCTATCTCGG ATTTACTCAG CTGGGATTCT AAGTCATGGA TTTGCGATCG 
TTGTGTTGAA GCCTAATGGT AATGCTTGTA AAGATGACAT GAGGTTTTAC 
ATTAGGGATT TGTTAACGAG AATGAAGATT GGAGATCTGG AGATGAAGAA 
ACAAGCTTTG GTTAAGCTGA ATGAAGCTAT GGAGGAAGAT GATAGATATG 
TTAAGATTCT GATTGAGATT AGTGATATGG TTAATGTTCT TGTTGGGTTT 
CTTGATTCTG AGATTGGGAT TCAAGAAGAA TCTGCCAAAG CTGTGTTTTT 
TATATCTGGG TTTGGTTCTT ATAGGGATGT TTTGATCAGA TCAGGTGTGA 
TTGGTCCTTT GGTTAGGGTT CTTGAGAATG GGAATGGTGT TGGTAGAGAA 
GCGTCTGCAA GGTGTTTGAT GAAATTAACT GAGAATTCTG AGAATGCTTG 
GTCTGTTTCT GCTCATGGAG GTGTTTCAGC TTTGTTGAAG ATTTGTTCTT 
GTAGTGATTT TGGTGGTGAA TTGATTGGTA CTTCGTGTGG TGTGTTGAGA 
AATCTCGTTG GTGTTGAAGA GATCAAGAGG TTTATGATTG AAGAAGATCA 
TACTGTTGCT ACTTTCATCA AGCTTATTGG ATCAAAGGAG GAGATTGTTC 
AGGTAAATTC TATTGATTTA CTGTTGAGTA TGTGTTGTAA AGACGAACAA 
ACCCGGGACA TCTTGGTTAG AGAAGGAGGA ATTCAGGAGC TAGTGAGTGT 
GTTATCAGAT CCCAATTCGT TGTCTTCTTC GAAATCTAAG GAGATAGCAT 
TAAGGGCGAT TGATAACTTA TGTTTCGGGT CTGCGGGTTG TTTGAATGCA 
TTGATGGGTT GCAAATTCTT GGATCATTTG CTGAATCTGC TAAGAAATGG 
GGAGATTTCT GTTCAAGAAT CAGCCTTGAA GGTCACATCT AGGCTATGTA 
GTTTACAAGA AGAGGTTAAG AGGATAATGG GAGAGGCGGG TTTTATGCCC 
GAGCTAGTTA AATTTCTCGA CGCCAAATCG ATAGATGTAC GACAAATGGC 
GAGCGTGGCA CTGTACTGTT TGATCTCGGT TCCAAGGAAC AGGAAGAAGT 
TTGCACAAGA CGACTTTAAC ATTAGCTACA TTCTCCAGTT GCTAGACCAT 
GAAGATGGGA GCAATGTGAG CAGCGATTCA GGTAACACAA AGTTTTTGAT 
ATCGATATTG ATGTCTTTAA CGAGCTGCAA TAGCGCGAGA AGAAAGATTG 
CGAGTTCAGG GTATTTGAAA AGCATAGAGA AGCTAGCAGA AACTGAAGGT 
TCAGATGCTA AGAAACTTGT GAAGAAGCTA TCAATGAACA GATTCCGCAG 
CATACTCAGT GGTATTTGGC ATTCCTAATT TTATTTTGTT TCCTTATAGT 
TTTTTTTTTT GTGAATTTTT CTTGAGTGTA TATTTTTACA AAGGTGTTTT 
TGC

Gene models with high sequence identity

AT1G61350.1 [+] show detail - ARM repeat superfamily protein
E-value: 0; Score: 99.90

InterPro Scan Digest

Program	Description	E-value
HMMSmart	Armadillo	310
HMMSmart	Armadillo	0.029
HMMSmart	Armadillo	260
HMMSmart	Armadillo	0.87
Gene3D	Armadillo-like helical	1.1e-40
superfamily	Armadillo-type fold	5.3e-57
Coil	coiled-coil	0
ProfileScan	Armadillo	8.767

See the detailed result >

AT1G61350.1

Model type: Protein coding
Short Description: ARM repeat superfamily protein
Computational Description: ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT2G45720.2); Has 1255 Blast hits to 1059 proteins in 157 species: Archae - 0; Bacteria - 2; Metazoa - 269; Fungi - 116; Plants - 761; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink).
Link: InterPro Scan - TAIR

Mutant lines with RAFL09-34-K22 introduced

F18506 - seed::increased size / seed::increased length
F26925 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

2 mutant lines found