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  3. RAFL09-37-J06

RAFL09-37-J06

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda06162)

full reading [+] show sequence

Nucleotide sequence: RAFL09-37-J06 - full reading 
AGAGACGGTG ATCGGGAAAT GTCGACGAAA GGCGCGGCGG CGGCGTACCC 
TAGCGCGGCT CGGATATCTG ATTCTCCATG TTATCTTCAG TACTCTGCTT 
CTCTCAAATG TCTTGAAGAA TTTGGATCAG ACAAGAGTAA ATGCCAGGAT 
CATTTTGATG TGTACAAGGA ATGCAAGAAG AAAGAGAGGG AAGCTCGACT 
GGAACGCAAT AAGACACGGT CGTTGTTCTC GTGAATGCAG ATCCTCGAAT 
ACCAATGATG TCTCAGAACA TCACCTAGCT AGTAGTATCC TGTTGTTTCA 
TTTGCAATGG CTGTGTTTGT ATGATCTATC TAAGTAAACA AGTGGAAAGT 
GTTTGTTAAT GTTACTTTTT ACTCCCCATT GGTGAATCAT GGTGTATACC 
TGTTAAACTT TGAGAGCAAG TGGTTATTTA TTTAGTTAGA GAAAAAAAAA 
AAAAAAA

Gene models with high sequence identity

  1. AT1G02160.1 [+] show detail - Cox19 family protein (CHCH motif)
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT1G02160.1

Model type
Protein coding
Short Description
Cox19 family protein (CHCH motif)
Computational Description
Cox19 family protein (CHCH motif); CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625); Has 56 Blast hits to 56 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 34; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL09-37-J06 introduced

  • F17431 - seed::increased size / seed::increased length / seed::decreased width
  • F18348 - rosette leaf::present in greater numbers in organism / rosette leaf::abnormal / cauline leaf::decreased size / cauline leaf::abnormal / whole plant::decreased height
  • F21112 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

3 mutant lines found