1. Home
  2. Full-length cDNAs
  3. RAFL09-38-M01

RAFL09-38-M01

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda06192)

full reading [+] show sequence

Nucleotide sequence: RAFL09-38-M01 - full reading 
ACCAACACAA ACACTAAGCT CTATCCTCCA ATGGCGGCAA TCACCGGATT 
CTCCGCTCTC TCAAACCATA TCTCTCCTGC TTCATCACTT CCGTCGTCGC 
GTTTACTCAA TTCCACTCAG TGTCTGTCCA GATTCTCAAA TGTGTCTTCG 
TTTCCCGCGC TCTCTACCTT TCGCCGGAGA AAGATCCCGT TGACTCCGGC 
GTGTTCTTCG ATAGTCGACG GAGATGAAGA AATTGAAGCA AGAGGTGATG 
ATGAGAATGA GATTAGAGAG ACATTGATGT TATCAGTCTC TCCTTTGCCT 
CTCCTCCTCG TTGCTTCTCT CCCTGGAGCC GAAACTGTAA GATCTGTGTT 
TGGACCCGTT GTGGAGATTG TAAAATCCTT GAATCTACCT GATTGGCTTG 
TTCATTGGGG ACATCCAGGG AACATGGCAG TGGTACTTTT GCTATGGGTG 
GCTATGGAAC ATACCTAGGC TTCCGGATTC GTTATTCTGA TGACATTGAG 
GAGAAGGCAA AGGCAAAAGA CCTGCACCCA AAGCTTCTAG CCGGAATGTT 
TTTCTTTTTC GCCCTTGGAG CAACTGGTGG TGTTATATCC CTTCTTACTT 
CCGACAAACC CATCTTCGAA AGTCCGCACG CTGTTACAGG ACTTATAGGT 
CTTGGCCTAT TGACGGTTCA AACAATCTTA CCATCTTTGT TCAAGGAGAA 
ACCCGAACTG AGGAACGTGC ACGGGATCCT TGGGAGCGGG ATAATGGCGC 
TTTTCCTCGT CCATGCTGCT TTCGGCCTTC AGCTCGGTCT CAGTTTCTAA 
TTATTCTTTA CTGATCTCTT CTCTTATGTT TGTATTCTTC AGCTGCAACC 
ACAACCATTT TTTTCTTTAA AGCCTTAAAA TTTCAATAAA AGAAGATATA 
TAGAGAAAAA CGCTTGTAAA CTAATGTCTT ATATATATAC TAAGGATGTT 
TTTATTGGCT GCTAAAAAAA AAAAAAAAA

Gene models with high sequence identity

  1. AT2G36885.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN:...
    E-value: 0; Score: 99.90

 

InterPro Scan Digest

See the detailed result >

AT2G36885.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 172 Blast hits to 172 proteins in 58 species: Archae - 0; Bacteria - 116; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL09-38-M01 introduced

  • F10716 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

4 mutant lines found