1. Home
  2. Full-length cDNAs
  3. RAFL09-39-J18

RAFL09-39-J18

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda06217)

full reading [+] show sequence

Nucleotide sequence: RAFL09-39-J18 - full reading 
AGAGAGAGAG AGAGAGAGAG AGAGAGAGAA AGAAAGATCC AACTTCCACA 
AAGAACCATG GAAGCTGAGA AAGAAACAGA ACAAGAAGGA AACTTGACAG 
TAATGAAACT TCCGGTGTTA CCAACTAAAC CCAACACTCA CAGCCACTCT 
ATGTCATCAC CAATTCACAG TTCCATATCA GCTTCAGTTC CCTTTAGCTG 
GGAAGAAGAG CCTGGCAAGC CCAAGCAACA CTCTACTTCT TCTTCCTCCT 
CTTCCTCTTC CTCACCATTA ACTTCTTATT CTTCATCTCC TTTTGAAACT 
CACAAGTCCT TAGAGCTACC ACCAAGGCTT CACTTACTTG AAAAAGATGG 
AGGATCAGTA ACCAAACTTC ACTCGCCTAT AACAGTCTTT GATGGACCTT 
ATAGCATGAC GACATCAAAA AGGATGGATT CACCTTCCTT TAGGATGATG 
GTGAAAGGTA GTGCTGATTG TTATGGGTCT TTCAGGAGTG ATATCGATGG 
TGATTTAGAG GATTTGGAAG TGGGCTCTAA GCAGCAGGAG AACTTGAGTA 
GTGGCTCTTT GGCTGTTGTG AAGAAGAGAG GGAGATTAGG GTTTTTTGGG 
TTTAGGAGGA GGAGAGCATT GAAAGGGAAA ACAGAGTTTG GTAGAGGTAG 
TTATGTGTTC CCATCTTCTG TAGACAGAGA GAGTGAATAC AGTAGAAAGG 
AAGAGGAAGA AGAAAAAGAA GACAAAAGGT TTGGTTATGA TGATACTGAT 
GGTATTAGTT GCAGCCAAAG CAGCAGGTTT TGTGATGTGA AGATCTCAAG 
CATTAGTAGA ACAGGCAGCT TCTCTACTCT GCCTGCACCA CCTTCTTCTT 
CTTCAAAGTC TCACTTTTGG ACGAATGTGT ATGCAGGACT AAAGCAAGTG 
GTTCCATGGA AGAGCAAGAA GACTACAGTT TGAGATTCTG CCATATCAAA 
GATTCGAAAG ATAAAACACC AAGTAACAAG AAAGCTTCTA TGGTTTCTAC 
AAGTATTTTT AAGCTTTTGT TTATGATTTT TTTCAATATT TCCAAGAAAA 
TGACACGACT AGTAAAACCA TTGTGAAACC CAGTTTTTTT TCACGCTTGT 
TGTTGTGTTT GAATGTTTTT GAGACTTTTG TAAAGAGAAA CAGAGAATCT 
TACGATGAAA AAAAAAAAAA AAA

Gene models with high sequence identity

  1. AT4G00950.1 [+] show detail - Protein of unknown function (DUF688)
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT4G00950.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF688)
Computational Description
maternal effect embryo arrest 47 (MEE47); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL09-39-J18 introduced

  • F03931 - Specific phenotypes were NOT observed.
  • F03940 - Specific phenotypes were NOT observed.
  • F06146 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

10 mutant lines found