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RAFL09-40-P17

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda06245)

full reading [+] show sequence

Nucleotide sequence: RAFL09-40-P17 - full reading 
ATTCTCTGTT TCGTGTTCCA CTTCACGATT GAGAGAACAC TTTCCTAAGT 
TTATCAAGAA CATTTCTTTT CAATTTCTCG ATTCTTTCTG GCTCATTCTC 
TCATCTCTGT TTCATATCTA AATTATTGAT TGAGAATTCG ACTTGTGGAA 
ATGGCAACAG TTGCATCAAA TCTCGCTTGT ATCGGAAAAG TAACGATGTC 
TAGAGCTAGT TCAATGGTAG GATGGAGGTT GCAGATAAAT TGCAGAAAGA 
AAGAGAAAGG AAGAGATCAG AGTCATTATC CTTACAAAGT CATTGAAATC 
ACTCCTCCTC CTAAATCTCT CGGCATTCGT TGCCTTCCTC ATAACCTTCA 
ATGTGGAGAG AACGTGATGA TCGAAGGGCA AACGTACACA ATCTCTGCTG 
TGACTCACCG GTATCAGCTC CGGAAAGGCA AATACGAGCC GAGTGAGAGG 
CGGCTCGATG TTCTCTCTGC TGCTAGATAC GTTTTAAACC TTTACTTCGA 
CAATTTGCTC CAAAACTCCT GACAACTTTT ATTTAGCTAA AAAGTTTGGT 
CTAGAGGATT TTCATTGTAT CCATGAATGC TTGTGAATTT GTTAAGCAAT 
GATTTGTACT TCTCTCAAAA AAAAAAAAAA AA

Gene models with high sequence identity

  1. AT5G40500.1 [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1...
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT5G40500.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL09-40-P17 introduced

  • F21403 - Specific phenotypes were NOT observed.
  • F23419 - rosette leaf::dark green / rosette leaf::decreased size / whole plant::decreased height / sporophyte vegetative stage::decreased speed / stem::present in fewer numbers in organism

Mutant lines with disrupted or induced

2 mutant lines found