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  3. RAFL09-41-P09

RAFL09-41-P09

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda08336)

full reading [+] show sequence

Nucleotide sequence: RAFL09-41-P09 - full reading 
GAGTACAACA CTTCTTCTTC TTCTCTCTAA GTCCAGTTAA AAATCATCTC 
TTTGCAATGT TGACTCTTTA ATCTTCGATT TATAAGCTCT CGAAGGAATC 
TATTACCTTC AATCTCTCTC GTTGTTAGCT CTTTGAATTG TAGAAGAGAA 
TGGGTTGCTT ACTTGGTTGC TTCGGTCGTC GGAAGAATCG TCGCCGTCAG 
AGACGCAGAG AATCTTTTCA GCCACGTTTA AACAGAATCT CTGAGGAAGC 
TGCAAAGGAT GTTCTTTTGA ATCTTAGGGT TCCTACTGTT GAAGAAGTCC 
CAAAGTATGC AAAAGATTCA ACTGTTATGG AAGTCCCTAA AATCTCGGAG 
GTGTCTCCAA AGGATAATCA TGTGAACGTT GTTGAGAAAG TCCCTACAGT 
TTCTGTAACT CCGATCACTG ATATCTGTGA CAAGGTTGAG GAGAAACAGA 
GTCCGAGTCC AAGTCCAAAT CGTAAGAGAG TAACTTTTGA CACCAATGTT 
AAAACATATG AACACATTGC AGTAGATGAA TCTGTTGAGC TCTTTGAAGA 
GAAGAAAGAA GAGGTGAAGT CGAGGCAGGC TCGATGTTCG TCTGAAGGGA 
GCGATGTTAC TTCTAACTCG TCAGGGTCTT ATCCTTCTAA CCATAGATAT 
CAGAATTGCA GAGAGAGTGA TGATGAAGAG GAGGATGTAA CGGATTGTGA 
CGATAGCGAT CTTGAGGATA CTGATGATGA TGATTGTGGG CTGCTAGATG 
ATGACTATTA TAATGATGAC AATTATGAGG ACAAGCTGCA CAACTGGGAT 
AAAGTAGTTT ATACGGAGGA GATTGCGGAT AATGTTATGG ATATAGAGAG 
GGTTGAAGAA AAGGGTAGTG TGAGTGTTAG AGACAGAAGT GGATATGTCA 
ATGCAGTACT GAACCCGATT GAGAATCTTT CCCAATGGAA AGCTGTGAAA 
GCCAAAGGAA GAACAACAAC TCAAACACAG CCTCGGAAGG AGAATGTGAT 
AATTGCTTCC TTCAGCTTGG AGTCTCAGGT TGATGATTTA TCATCAACAT 
TCAGCTTGAA CCGGAAATCA AGAGATGAAA CTGAGAAACA GAGAACTCAA 
GAAATAGCTG TTGATGCTAG TCTTTCAACT TGGTTATCCA CATCACAAAC 
CACGACCAGC GGTTGTAGCA GTGTTGAAAC CACAATGTCC GAGAAGAAGA 
AATACTCGAA ACTGGTTCAA TGCCATGATG AAAGACCTAT ATTGGGCGCG 
TTAACTGCAG AGGAGATAAA GCAGTTCTCA GCTACGAATT CGCCAAGGAA 
ATCGCCAAGT AGAAGCCCTG AATCACCGAT AATTGGAACA GTTGGTGGTT 
ACTGGAACAG TCACTCAATG GCAACGAACA AGTACAGTCG AAGTTCTTAG 
AACTCCAATT CCACAACAGA GAAAGAATTC CACACATGTT TGGTTACTAC 
ATTGCCTTTG TGAAATTATT TTTATCACTC TGTTTGTTTG TGTGTGTGTG 
GTTGATAACA AAATCGTTGT GTTTTGTGTG TGATTTGATT TAGTAATATT 
CATTCTATTT GTTTGTATTT TACAGAAATT TGTCTACTTT ATTTCACAAG 
TGAATCAAAG TTTTGTATTT TTTTTCCT

Gene models with high sequence identity

  1. AT5G44040.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G04030.1); ...
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT5G44040.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G04030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL09-41-P09 introduced

  • F21005 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

2 mutant lines found