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  3. RAFL09-43-D14

RAFL09-43-D14

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda08368)

full reading [+] show sequence

Nucleotide sequence: RAFL09-43-D14 - full reading 
GGAAAAAATC TCTCTTTCGA ATAAAAAAAA AAATCTCAGA ATCCAAAAAT 
GGGTCGTGTC CGAAAATCAG ATTTCGGTTC CATTGTTCTT GTTCTGTGTT 
GTGTCCTAAA TAGCTTACTC TGTAATGGAG GCATCACCAG TAGATATGTC 
AGAAAATTAG AAGCAACCGT TGATATGCCT CTTGATAGCG ATGTTTTTCG 
TGTTCCTTGT GGCTACAATG CTCCTCAACA GGTGCATATA ACACAAGGAG 
ATGTAGAAGG AAAGGCAGTG ATAGTATCAT GGGTGACACA AGAAGCAAAA 
GGATCTAACA AAGTCATTTA CTGGAAAGAG AATAGCACCA AAAAGCACAA 
AGCTCATGGC AAAACCAATA CTTACAAGTT CTACAATTAT ACTTCTGGTT 
TTATCCATCA TTGCCCTATC AGAAACTTAG AGTATGACAC CAAGTACTAT 
TATGTGTTAG GTGTGGGACA AACGGAGCGT AAGTTTTGGT TCTTCACTCC 
TCCTGAGATC GGTCCTGATG TTCCCTACAC TTTTGGTCTC ATTGGGGATC 
TTGGGCAGAG TTATGACTCA AACATAACCT TAACACATTA TGAGAATAAC 
CCAACAAAAG GGCAAGCGGT TTTGTTCGTC GGCGATATCT CATACGCTGA 
TACTTATCCG GATCATGACA ATAGGAGATG GGACAGTTGG GGAAGATTTG 
CTGAAAGAAG CACAGCTTAT CAGCCTTGGA TTTGGACTAC CGGAAACCAT 
GAACTCGATT TTGCCCCGGA GATTGGTGAA AACAGACCGT TTAAGCCGTT 
CACGCATAGG TACCGAACTC CTTACCGATC ATCAGGCAGC ACCGAACCAT 
TCTGGTACTC GATAAAGAGA GGACCGGCTT ACATAATCGT GCTAGCTTCA 
TATTCAGCAT ATGGAAAATA CACACCACAG TACCAATGGC TCGAAGAGGA 
GTTCCCAAAG GTTAACAGAA CGGAAACTCC GTGGTTGATT GTTCTGATGC 
ATTCACCATG GTACAACAGC TATGATTACC ATTACATGGA AGGTGAAACA 
ATGAGGGTAA TGTATGAGGC TTGGTTTGTC AAGTACAAAG TAGATGTAGT 
TTTTGCAGGT CATGTCCACG CCTACGAAAG ATCGGAACGT GTATCAAACA 
TAGCTTACAA TGTTGTTAAC GGCATTTGCA CTCCAGTCAA AGATCAATCA 
GCTCCAGTCT ATATCACCAT TGGTGATGGA GGCAATATTG AGGGCTTGGC 
TACCAAAATG ACTGAGCCTC AGCCTAAGTA CTCTGCCTTT AGAGAAGCAA 
GCTTCGGGCA TGCTATATTC TCGATAAAGA ACAGGACGCA TGCTCACTAT 
GGATGGCATA GGAACCATGA TGGTTATGCT GTGGAGGGTG ACAGAATGTG 
GTTTTATAAC AGATTTTGGC ATCCTGTTGA TGATTCTCCT TCTTGTAATT 
CTTGAGAATC TATGAGGAAT AGGATTTGTT GTATCTCTAT GATTGAACAA 
CCATCCAAAT AAATGAATTG TTTGA

Gene models with high sequence identity

  1. AT2G16430.2 [+] show detail - purple acid phosphatase 10
    E-value: 0; Score: 99.93

 

InterPro Scan Digest

Program Description E-value
Gene3D Purple acid phosphatase, N-terminal 1.5e-38
Gene3D no description 3.2e-113
superfamily Metallo-dependent phosphatases 7.9e-99
superfamily Purple acid phosphatase-like, N-terminal 1.6e-40
HMMPfam Metallophosphoesterase 7e-27
HMMPanther ACID PHOSPHATASE RELATED 4.7e-161

See the detailed result >

AT2G16430.2

Model type
Protein coding
Short Description
purple acid phosphatase 10
Computational Description
purple acid phosphatase 10 (PAP10); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 12 (TAIR:AT2G27190.1); Has 1830 Blast hits to 1814 proteins in 380 species: Archae - 3; Bacteria - 548; Metazoa - 186; Fungi - 79; Plants - 763; Viruses - 0; Other Eukaryotes - 251 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL09-43-D14 introduced

  • F06447 - Specific phenotypes were NOT observed.
  • F14829 - Specific phenotypes were NOT observed.
  • F26525 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

8 mutant lines found