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  3. RAFL09-49-F14

RAFL09-49-F14

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda06417)

full reading [+] show sequence

Nucleotide sequence: RAFL09-49-F14 - full reading 
GAAGGGAAAA AACCAAAAAA ATATATCTTA CAAACAAAAT AAGGGTGCAA 
AACGTATAAG AAAATAAAAG AATGGGATCA AAGTGGAATA AAAGAATATT 
AGGGCGTCGG TGACGTGAAG CTTCGCTGCT GGGAGAAAAA AGCTCACATG 
CGTATTATCT CAGTCTCAGC TATATTTAGA ACAACAACAC ATGTCTGAAC 
ACATTACAGT TCCTATATCT GTTTCGAATT CAAATCTCCT GTCCTTTTTT 
CATATATAAT AATTCATCAT AAATATTTAT TGATTTGATT CTATCTCTTA 
TATATATTTT CGATCTCTCC TGAAAAGAGA AAAAAGTTGG AAACTTCGAC 
GAATGTGTTT ATAAATCTTT TTATTTTCTA TCTGTCTTGA TTTAGTTTTA 
TCTTTTTTGG AATCGGTCTG AAGTTGGACA AAAGAATCCG CCATTTTCTC 
CTCGGTCTCT CTGCTCTTCT CTTCAGTATC GGATCTGGGT CTCCTTCGCT 
TTCGTTTCAA GATTATTTTG GGAGACGAGG AGGCGTTAGC TGTAATTCAT 
TGTATACTTG CTTTGGCTAT TAAAGCCGTC ACACAAAAAA AGTAAAAGCA 
ACACACACAC ATAAATAGAC ACACTTTTTT ACGTATATGT GTGTCTTCTT 
TCGTCTCTGT TGGGAATAGA TCTTGTCCTA AGAGATCACT TCGAGTCTGA 
TCTAAAGTGA GAAACTTTGG TTCTTGTTTT GGTTTTTGGA ATCTTGTCTA 
ATCTGGGGAG ATAATGGGAA TGAGTCTCGA TTTCGATGTT GATCTTGAGA 
AAGGAATCAT AGATTGCGAC AATGTTTATA CAAAATCACC GGAGAAGCCG 
ATGTCTCCTG ATAACAAACC GGTAATAACC GGAGAAGAAA GTGTTGGTTC 
GTTAGAGAAT GATACAAGTC CGGTTCAATG TGGAATCAAT AAACCGGGAT 
GGGGGAGAAG CGATCGGAAG GAGAAACGGA AGAAATCTGC GTCGAAGCCT 
CCTCGACCGC CGCGTGGACC GTCGCTAGAC GCGGCGGATC AGAAACTTAT 
TAGAGAGATC GCTGAATTGG CGATGTTGAA ACGCGCGAGA ATCGAACGTA 
TGAGAGCTTT GAAGAAATCA AGAGCGGCTA AAGCTGCGTC TGCCGCTTCT 
TCTTTAGGCA ATGTATTGGC CACTCTTTTC ACCGCTATTT TCTTCTTTGT 
CCTCGTTTTC CAAGGATTGT CACCGAGAGC AGCCGGTAGC TCCGGGAAAT 
CTCACTTAGT AGTCGCCGGC AAAGCCAATG GTGGTTTTGT TTCGGTTCAA 
TATGCGGGAA ATCCGTCGGC GAGCGAACCG GATGGAGGTT ATACCGGACC 
AGTTTTAGCA CAGAGACCAA ATTTACTAAA ACCGGTGTCC GGTTTGGAGA 
ATGAAAAGAA GAGTTCACAG TGAAAGCGTA ACGAAATGGT TAAGAATTGG 
ACAGTTCCAT ACTGGTTTGC TCAAACCATT TATCGGTTTA GATTGTCGGT 
GAGACATGTA CCGATAAACT TTTTGGGAAA ATCGGCTGCT TTCTCTGCGG 
CTGTGAAACG ATAATATTAT CCGATGTGGG TAAGAAAGTA GTTTTGTGTC 
AGTTTTTTCT TGAATAAACT GAGAGAAGTT TACAAATAAT AAAAATCAGT 
GTTATATTAT CC

Gene models with high sequence identity

  1. AT3G17120.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02380.1); ...
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT3G17120.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02380.1); Has 67 Blast hits to 67 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL09-49-F14 introduced

  • F05439 - Specific phenotypes were NOT observed.
  • F08142 - seed::increased size / seed::increased length
  • F09804 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

5 mutant lines found