1. Home
  2. Full-length cDNAs
  3. RAFL09-57-L15

RAFL09-57-L15

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda17772)

full reading [+] show sequence

Nucleotide sequence: RAFL09-57-L15 - full reading 
GACGGTTAAT TCATTTCTTA TCTATCACAC AAAGTTGAAT CGTAACCCTA 
AGCGAATTCA ACAATCGAGA GAGCGAGAGA GATCAATTAA CCCCAGCGAA 
TCGAATATGC CGAAGAAGAT GGGTCTGAAC AGCAAGGCGG AGGTCGCCAA 
ATCTCGTAAG AACGCCGCGG AGGCTGAGCA GAAGGATCGT CAGACTCGGG 
AGAAAGAGGA ACAATACTGG CGCGAGGCGG AAGGTCCCAA ATCCAAAGCG 
GTGAAGAAGC GAGAAGAGGA AGCGGAGAAG AAGGCAGAGA CCGCCGCTAA 
GAAATTGGAG GCGAAGCGTC TGGCTGAGCA GGAGGAGAAA GAGTTGGAGA 
AGGCTTTGAA AAAGCCAGAC AAGAAGGCGA ATCGCGTCAC TGTGCCGGTT 
CCTAAGGTCA CAGAGGCTGA GCTCATCCGA AGACGCGAGG AAGATCAAGT 
GGCTCTGGCT AAGAAAGCAG AAGACTCTAA GAAGAAACAG ACTCGCATGG 
CAGGGGAAGA TGAGTATGAA AAGATGGTTC TGGTGACCAA TACCAATCGC 
GATGATTCTC TCATCGAGGC ACATACCGTT GACGAGGCTC TTGCACGGAT 
TACTGTGTCA GATAACCTGC CCGTTGATCG ACACCCGGAG AAGAGGCTCA 
AGGCTTCTTT TAAGGCATAT GAAGAAGTGG AACTTCCAAG GCTCAAGTCT 
GAGAAACCAG GTCTAACTCA CACACAGTAC AAGGACTTGA TATGGAAGAT 
GTGGAAGAAA TCACCAGATA ATCCTCTTAA CCAGGCTGCG GCTGCTGCTG 
CTAATGAGTG AAATGCAACC TGGAGTCAGA ACAATGGAAG GTGTGATGAA 
GAAGGAGATG CATGGCAGAG AGCATGATGA AAATCTTTTG TTTCCCAGAA 
AATATGTTTA GTGAGAGATA CTGTGTAACA TTGCTTATTG TTTCTTGTGC 
TTTGTGTATA AACACTATGA TATAGCCAGA CAATATCGAT TTAATAAGGA 
TACCTGTGAG CTGGAATAAT CACAATCACA AAAAAAA

Gene models with high sequence identity

  1. AT1G16210.1 [+] show detail - unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1014 (InterPro:IPR010...
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

Program Description E-value
HMMPfam Protein of unknown function DUF1014 3.7e-43
HMMPanther Protein of unknown function DUF1014 3.7e-43
Coil coiled-coil 0
Coil coiled-coil 0

See the detailed result >

AT1G16210.1

Model type
Protein coding
Computational Description
unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1014 (InterPro:IPR010422); Has 16107 Blast hits to 8386 proteins in 1107 species: Archae - 26; Bacteria - 3370; Metazoa - 4013; Fungi - 1516; Plants - 526; Viruses - 120; Other Eukaryotes - 6536 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL09-57-L15 introduced

  • F22627 - rosette leaf::increased length

Mutant lines with disrupted or induced

4 mutant lines found