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  3. RAFL09-58-D08

RAFL09-58-D08

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda17774)

full reading [+] show sequence

Nucleotide sequence: RAFL09-58-D08 - full reading 
CCCGAAAACG TGAGTCTCTT CTCTTCTCTA GTGGTGCGTG GTGACTCACA 
CAAGTCTCGA GCCAATCCAA TTCTCGAGAA TCACAAAACG GAGATTCAAA 
CCGATGAACA AAACCATTCG AAAATCAGAA GAATCCGAGT CCAATTGTTG 
CGAGATGAAA TTTTGAGTTA CTTTAAGCGT CGTCAAAAAT GGAGGTGAAT 
CTCGTTTTGC TTCTGTGTAT AGCTTTGATC TTCGTCGCTG ATACTAAGGT 
TGATGGAGAG GCACAAGTTG TTGTCTCGAA TTCGAATTTG ACAGATACAA 
GATTTGGTGG TGGCTCTGAA AATGTTACTG ATTCTTCTTC TAAGAGTATA 
ATTACTATAG ATCATTCCAA AAACTCGACT AATGATGATG ATACACAGTT 
GGGTGATGGA TCTAAGATGA TTGGTAGTGA TAGTAGTAAG AGTGACCAAG 
GGAAGATAGC TAGTGATGAG AGTGATAAGG AAGAGGAGGA GGCTGTGAGC 
AAGAATTCTT CAAGGAAGAA ACAAGGGTTT CATGGTGAGG AATGTGATCC 
ATCTAATATG TGTATAGATG ATGAACATGA GTTTTCCGCT TGTCTGCGAG 
TTCCGGGTAA CGATGCTCCT CATCTCTCAC TTTTGATTCA GAACAAAGGC 
AAAAGGGCTT TGATTGTTAC GATAACTGCT CCGGTTTTTG TTCGGTTAGA 
GAAAGATAAA GTCCAGCTTC TGCAAAACGA AGACATAAAG GTGAAAGTTT 
CTATTAAGAA GGGAGGGTCC AACGATAGCG CAATCGTACT AGCTTCCAGT 
AAAGGACGTT GCAGGCTTGA ATTAAAGGAT TTGGCGGCAG CAGCACATGA 
AACAGAAAGC GATGATACAG TTTCTGTTTC TCGTCCTTCT ATTCTCAATA 
TCAGTTCGCG AACACTCATC GTCATCATCA TGATCTCCTT CCTCGTACTC 
TCCCTTGTCA TCATCCCGGT GATCATTCAT GTTTACAAGA ACAAGTCACG 
GGGAAACAAC AAATACCAGA GGCTAGATAT GGAATTGCCA GTCTCTAACC 
CCGCATTGGT GACAAAATCT GACCAAGAAA GTGGTGATGA TGGATGGAAC 
AATAACTGGG GAGATGATTG GGACGATGAA AATGGTGGTG GAGACGAAGA 
ACAGCCGAAT ACTCCGGTGT TACCACTCAC ACCGAGCCTC TCCTCTAGAG 
GGCTTGCTCC GAGAAGACTC AGTAAAGAAG GCTGGAAAGA TTAGTTTCAC 
TCTGCTTTCT CTTTGGTAAT GCAATAGGAG AAAGACAAGG CAGAGGAAAG 
TAGTGAAGAG GAGGCAAAAT CAATATCCCA CTCATCGTAA CATAGACTTT 
GTTTAGACTT TGAATGAAAT ATTTTGCAAC GAAAAAAAAA A

Gene models with high sequence identity

  1. AT1G64385.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
    E-value: 0; Score: 99.93

 

InterPro Scan Digest

See the detailed result >

AT1G64385.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 66 Blast hits to 66 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 4; Plants - 51; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL09-58-D08 introduced

  • F22819 - Specific phenotypes were NOT observed.
  • F24103 - Specific phenotypes were NOT observed.
  • F26208 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

6 mutant lines found