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  3. RAFL09-64-O14

RAFL09-64-O14

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda08605)

full reading [+] show sequence

Nucleotide sequence: RAFL09-64-O14 - full reading 
GTCAAATCAT TTTCGACGAC TGTTATTAAT AATTAATTCG TTAATGACGC 
ACCGTTAGTC AACTCCGCTT CGTATTAATT ACTCCTCCGA TCTCTTTCTT 
ATTCTTCTCC GGCGACACTT CCCTTGCTTC TCCCTCTTAG GACTCTCTCT 
ACGAATCTGT AAGCTTCAAA TTCTTACGCC ACACTCCGAG ATTCGCTTCT 
GATTATTGTA TGAATTTTTG AGCTCCAAGG ATCCACTGCC ATGTATTTAT 
GCTGCTAAAG CTTGAAGGCA GTAGTGGAAT CACCATTAAG TTCTTTGCTT 
TGTAATTTAG CTTGATTTGA GAATAAACAA ATGGGAAAAG CATCAGGCTT 
GCTTCTGTTT CTCTTGGGTT TTGGGTTCTT TGTTGTCACA TATAATCTTC 
TGACACTTAT AGTTCACAAT AGATCTGGTG TGAGTAATTC AGATGGAAGT 
CCACTTCTGG ATCCTGTTGT TCAGATGCCT CTAAATATTA GGAAAGCCAA 
GAGTTCTCCA GCACCTTTTC ATGTTGCCTT AACAGCTACA GATGCACCTT 
ATAATAAGTG GCAGTGTCGT ATTATGTATT ATTGGTATAA GCAGAAGAAA 
GCTCTTCCTG GTTCTGATAT GGGTGGCTTC ACCCGTATTT TGCATTCCGG 
TAATTCTGAT AACTTGATGG ATGAAATACC CACATTTGTG GTTGATCCTC 
TTCCTCCAGG TCTTGATCGG GGGTATGTTG TCTTGAATAG ACCATGGGCA 
TTCGTGCAAT GGCTTGAAAG AGCTACCATC AAGGAAGACT ATGTGCTCAT 
GGCAGAGCCT GATCATGTAT TTGTTAATCC CCTTCCCAAT TTGGCTGTTG 
GAGGATTCCC AGCCGCTTTT CCGTTTTTCT ATATTACTCC TGAAAAGTAT 
GAAAACATAG TCAGAAAGTA TTATCCAGCG GAGATGGGGC CAGTAACAAA 
TATCGACCCC ATTGGCAACT CTCCTGTTAT CATAAGCAAG GAATCACTTG 
AAAAGATTGC TCCTACATGG ATGAATGTCT CGCTGACAAT GAAAAACGAT 
CCAGAAACTG ATAAGGCATT TGGATGGGTG CTGGAAATGT ACGGTTACGC 
AATTGCATCT GCTATACATG GGGTGCGTCA CATACTTCGG AAGGATTTCA 
TGCTTCAGCC TCCGTGGGAT TTGTCTACCA AGGGGAAGTT TATCATTCAT 
TACACTTATG GATGCGACTA CAACATGAAG GGGGAGCTGA CATATGGCAA 
AATAGGAGAG TGGCGATTCG ATAAGAGATC ACATTTGCGG GGTCCTCCTC 
CAAGGAACAT GTCCTTGCCG CCTCCCGGTG TTCCCGAAAG TGTGGTGACA 
CTTGTGAAGA TGGTGAATGA AGCTACTGCG ACTATCCCTA ATTGGGACAC 
TCTCTAACTC ACATCCACAC ACAAAACACA AACCATAGGG ACAAATCCAT 
ACAGCAACAA TATTTTGCCT AATTTTTTTT TCCTTCTCCC TTTACTTCCC 
TTCTTGTCTG TTTTTTCTTG TAATGGTTAA ATTATGAACT TGAGTAGTAA 
ATTACAAAAT TATTTGTTTG ACT

Gene models with high sequence identity

  1. AT5G13500.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT5G13500.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25265.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL09-64-O14 introduced

  • F02222 - Specific phenotypes were NOT observed.
  • F09848 - Specific phenotypes were NOT observed.
  • F27816 - seed::increased size / seed::increased length

Mutant lines with disrupted or induced

5 mutant lines found