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Full-length cDNAs
RAFL09-65-F17

RAFL09-65-F17

RIKEN Arabidopsis Full-length cDNAs

GGATAAAACA GAAACCTAAT CCCTTAAACC TCGCCGGCGA CGGAAAATGG 
CTTTCGCGTC TCCTTCGCTC CGTCTTCTTC CTCAGTCTCC GTTAGGTCGA 
ATAACATCTA AACTACACCG TTTCAGTACT GCGAAACTCT CACTCTTCTC 
CTTTCACCAT GATTCTTCAT CTTCTTTGGC TGTCAGAACT CCGGTATCTT 
CCTTCGTCGT CGGCGCTATC TCCGGAAAAT CCTCTACCGG AACGAAATCG 
AAATCCAAAA CCAAACGGAA ACCACCTCCT CCTCCGCCAG TCACTACTGT 
GGCTGAAGAG CAACACATTG CTGAGTCAGA GACAGTCAAC ATTGCCGAAG 
ATGTCACTCA ATTGATTGGA AGCACACCAA TGGTCTATCT CAATAGAGTC 
ACAGATGGTT GTTTGGCTGA CATTGCTGCC AAGCTCGAAT CAATGGAGCC 
CTGTAGAAGC GTCAAAGATA GGATCGGTCT GAGCATGATC AACGAGGCAG 
AAAACAGCGG AGCTATAACT CCGAGGAAGA CTGTATTAGT AGAACCAACA 
ACCGGAAACA CTGGCCTTGG GATTGCATTT GTGGCTGCAG CTAAAGGCTA 
CAAGCTTATA GTGACAATGC CAGCTTCTAT CAATATTGAA AGGAGGATGC 
TTTTACGTGC ACTAGGAGCA GAGATTGTGC TAACGAATCC AGAGAAGGGT 
CTCAAAGGAG CAGTGGATAA AGCCAAAGAG ATTGTTCTCA AGACAAAGAA 
CGCATATATG TTTCAGCAAT TCGACAATAC AGCAAATACA AAGATCCACT 
TTGAAACTAC AGGACCAGAA ATCTGGGAAG ATACAATGGG TAATGTCGAT 
ATATTCGTTG CCGGAATAGG AACTGGTGGT ACTGTAACTG GTACTGGAGG 
TTTCTTGAAA ATGATGAACA AGGATATTAA GGTAGTTGGC GTTGAACCAT 
CAGAAAGAAG TGTGATTTCT GGAGACAACC CTGGTTACTT ACCGGGAATC 
TTGGATGTTA AATTACTTGA TGAAGTGTTT AAGGTTAGCA ACGGGGAAGC 
GATTGAGATG GCGAGGAGAC TAGCTTTAGA GGAAGGATTG CTGGTTGGGA 
TTTCATCTGG AGCTGCTGCA GTAGCAGCAG TCAGCTTGGC TAAAAGAGCA 
GAGAATGCCG GTAAACTAAT CACGGTTCTG TTTCCAAGCC ATGGCGAGCG 
GTATATCACA ACGGCTCTGT TTAGTTCCAT CAACAGAGAA GTCCAAGAGA 
TGAGATATTA GTAGCAGCCA TTAGAAAAGC CCCCAAAGTT TGGTCCTTTT 
GGAGAGTGTA AACAACAAAT CTCTTTGCAA TACAGAAAAG AGAGGTTTCA 
GAAGACTGTG AGGTTAGAGC TCACACGAGA ACTGAGAGAT AAACATGTCT 
CGAGCCCAAC CAGTTTTATT CAAAGATTTG TGAATGTATA GAAGATCATA 
GACCTTGTTG CATTATTCTT CTTCTTCTCA CTCATATGTC AGGGAAGTAT 
GCTGAACAAA TAAAAGTTTG ATCATCTAAA CCCTGAAATT GATTTGAGAT 
CTCCAAGATT GGAAAAACTC ACCGAGAGCA AGCATGTATG TACATTATAT 
GGTGGTTAGA ACG

Gene models with high sequence identity

AT3G03630.1 [+] show detail - cysteine synthase 26
E-value: 0; Score: 100.00

InterPro Scan Digest

Program	Description	E-value
PatternScan	Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site	0
Gene3D	no description	5.8e-53
HMMPfam	Pyridoxal phosphate-dependent enzyme, beta subunit	5.7e-50
superfamily	Pyridoxal phosphate-dependent enzyme, beta subunit	6.8e-82
HMMPanther	CYSTEINE SYNTHASE	8e-124
HMMPanther	SER/THR DEHYDRATASE, TRP SYNTHASE	8e-124
HMMTigr	Cysteine synthase K/M	1.2e-158
HMMTigr	Cysteine synthase A	6.3e-160

See the detailed result >

AT3G03630.1

Model type: Protein coding
Short Description: cysteine synthase 26
Curator Summary: Encodes a protein that possesses S-sulfocysteine synthase activity and lacks O-acetylserien(thiol)lyase activity.
Computational Description: cysteine synthase 26 (CS26); FUNCTIONS IN: cysteine synthase activity; INVOLVED IN: regulation of hydrogen peroxide metabolic process, cysteine biosynthetic process, regulation of superoxide metabolic process, photosynthesis; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site (InterPro:IPR001216), Cysteine synthase A (InterPro:IPR005859), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Cysteine synthase K/M (InterPro:IPR005856); BEST Arabidopsis thaliana protein match is: O-acetylserine (thiol) lyase isoform C (TAIR:AT3G59760.3); Has 20790 Blast hits to 20777 proteins in 2676 species: Archae - 415; Bacteria - 14597; Metazoa - 363; Fungi - 563; Plants - 551; Viruses - 2; Other Eukaryotes - 4299 (source: NCBI BLink).
Link: InterPro Scan - TAIR

Mutant lines with RAFL09-65-F17 introduced

F12616 - seed::increased size / seed::increased length

Mutant lines with disrupted or induced

2 mutant lines found