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  3. RAFL09-66-N02

RAFL09-66-N02

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda08650)

full reading [+] show sequence

Nucleotide sequence: RAFL09-66-N02 - full reading 
ATGGCCGGAC TTCTAGCTTG GGCTGCCGAT GTCGTCGGTA AAAATGGAAA 
AGAAGGAGAC GATGAGAAGG ATCGGATCCC ATTGGTTTTC ACGGAGGAGC 
AGCAGAAATA CGTCGATGAG CTTGGCCGAA AAGCGACAAA CCTCAGCCGT 
TCGATCCAAG ATCTGCGGCT CAGATTGCCT CCACCGGATA TCTCCCAGCG 
TCTACCTGAC CTTCATGCTC ACTCCCTTGC GTCCAATGCC GCTCTCACTC 
TTCAGCTTGA TTCGCACTCC GCTACTCGTG AACAGGCACA CATGAGAGAG 
CAGACACTGC TGGAAGAAAA TAGTGCATAT GAGAATGCAA TATCAACCTG 
TGAGACAAAA ATAGAAGAGA AGAGGAATGA AGCAGATTCT CTTCTTAGAA 
AGTTGAAGGA GCTAGAAGCT GTAGAGGAAA ACTTGAAAAC TGAGCAGGAT 
AATGCACAAG CTTCTCTAGA TGCAAGGCAG TCCAAAAGCT CTAGTGAAAC 
TGTTATTCAG CCTGATGGGA ATGGAAAAGA TGGAGCAGAT ACAGAGGCCA 
TGAAGTCCTT TATGCTAGAG AAGTTGGAGA GCAAAAAGAA CGATATGAGT 
TTAATGGAAG AAAAAGTTCA GGATTTAGAG AGGAGTTGGG CTGTTATACA 
GGAAAGAGCA CTGAAGCAGC CTTCTCCAGC TCAGAGAGAG AAGACACTGG 
ATAAACAACT TCATAGCCTA ATCGAGCAAT TAGCTGCAAA GCAGGCACAA 
GCAGAGGGGA TTGTTGGTGA GATTCATCTA AATGAGATGG AGTTAGAGAG 
ACTAAACAAT TTATGGAGAA GATATGAAAG CTTTAACGTT GAAGGGAACG 
CTGCGAGGAA CAGATTCAAG AGAACAAATT CAGATAGAGA ATTTACATCA 
GACCACGAAG TTGATGGTCA TTCCTACCTT CCATATTCAT CTGCTACAAG 
AAATGGGACC CAAACAAGGC TTATGTATCT CAGGTCAGCT TTTGTCGTCT 
ACATTTTGGC TTTGCAAGTC CTGGTTTTCA TCAGAATTTC CTTTTGAGAA 
GTTGTGTACA CGAGTAGTCT GTTCTGCTTT TAGTTTGCGC AAGGGAGTCA 
AAATACTGCA TATAAAAATT TATAGGAATA CAATAATTGT TGTCAAATGG 
TTTTCTGTCC TTCCATATGG ATATATGGCA ATTGAATACT GAGACTCCTA 
CATGAATCTT TCTTTACAAT TTTTCTTGAT ATTAGATATA TGTCTCCACT 
ACTCATTCTT GAGGGATGCT TTCTAGTTAT CTGTCTTCAT CT

Gene models with high sequence identity

  1. AT5G15880.1 [+] show detail - unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; M...
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT5G15880.1

Model type
Protein coding
Computational Description
unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL09-66-N02 introduced

  • F15304 - seed::increased size / seed::increased length / seed::decreased width

Mutant lines with disrupted or induced

3 mutant lines found