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  3. RAFL09-67-C15

RAFL09-67-C15

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda12365)

full reading [+] show sequence

Nucleotide sequence: RAFL09-67-C15 - full reading 
AGATTTCTCG GACTTTCTTT CAATAGTGGG AAAAAGACAC AGAATCTCAA 
AAAAGTCCTC TCTTGTCCAA AGTCCAAAGC TTTTGAAAGA GACCATAAAA 
ACAGAGCTTA ATCTCTCTCT GTCTCTGTCT CTCTCTCTTT TGGAGGCTTG 
AGGATGACGA GAAGAGCTGA ATTTGAGATG GGTTTGTTCG TGATTCTTCA 
ATCCATGTTT CTGATATCTC TATGTTCATC ACAGAAACCT GAGGAGTTCT 
TACCTGAGAT ATCACCAGAT ACTTCTCCTC AACCGTTTCT TCCTTTCATT 
GCACCTTCTC CAATGGTTCC ATACATAAAT AGTACCATGC CTAAACTATC 
AGGGCTTTGC TCGCTTAATT TCAGTGCGTC TGAGAGTTTG ATTCAGACTA 
CTTCACACAA CTGTTGGACT GTTTTTGCTC CATTGTTGGC AAATGTGATG 
TGTTGTCCTC AGCTAGATGC TACACTCACA ATAATCCTTG GTAAAGCGAG 
TAAAGAAACC GGTTTGCTTG CTTTAAACAG AACCCAGTCT AAGCACTGTC 
TCTCGGATTT AGAGCAAATC TTGGTAGGAA AAGGCGCTTC AGGTCAGCTT 
AATAAGATCT GTTCTATTCA CTCGTCGAAT CTCACTTCTT CGTCGTGCCC 
TGTTATCAAT GTCGATGAGT TTGAAAGCAC GGTGGATACA GCGAAACTTC 
TTTTGGCCTG TGAAAAAATT GATCCTGTGA AGGAATGTTG CGAAGAGGCT 
TGCCAAAATG CGATACTCGA TGCTGCTACG AATATATCTC TTAAAGCATC 
AGAAACTTTA ACTGATAATT CGGATAGGAT CAATGACTGC AAGAACGTAG 
TAAACCGCTG GCTCGCTACT AAACTTGACC CTTCTCGGGT TAAGGAAACT 
CTCAGAGGAT TAGCAAACTG CAAAATCAAT AGAGTTTGTC CTCTTGTCTT 
TCCGCACATG AAGCATATTG GTGGTAACTG CAGCAACGAG TTGAGTAACC 
AAACGGGTTG TTGCCGTGCA ATGGAGAGTT ATGTGTCTCA CTTGCAAAAG 
CAAACACTTA TAACCAATTT GCAAGCTTTA GATTGCGCAA CCAGCCTTGG 
GACAAAGTTA CAGAAACTGA ACATCACTAA GAACATATTC AGTGTTTGTC 
ATATAAGTCT CAAGGACTTC TCTCTTCAAG TTGGAAACCA AGAATCTGGT 
TGTCTATTAC CGAGCCTACC ATCGGATGCG ATATTTGATA AAGACACGGG 
GATAAGCTTT ACTTGTGACC TCAATGACAA CATTCCCGCT CCGTGGCCTT 
CATCTTCTCT ATCCTCAGCC TCTACCTGTA AAAAACCTGT TAGAATTCCT 
GCTCTTCCAG CTGCTGCCTC CTCGCAACCT CGTCTCCACG ATGAAGGAGT 
GACACGTTTG GTGATCTTTG TCTTGTCTAT GCTTCTTGTG ATGCTTCTGT 
CATAGTACCA GAACTAAGCC GGATCCAGTC TTCTCTTATA CCGGTTTACT 
AGTCAATAGG TGTGTTTGTG TAGATCAAAC TGGTACAGTC AGCTACAAAA 
GTCGGATGTT GACATGACCG GTTCAAGTGT ATGAGTTGTT GAGGTATAAG 
TTTCGGAAAG TCTTTTTATC TTTATTGATT TATGATTCTT GAAAACCTTT 
TTAATGTAAA GAAAAGGTCT TGTAGGGTTT ATAACGTAAG GTTATAATAT 
ATTTATTTAT AGACTGTCGA TTTCATAATT

Gene models with high sequence identity

  1. AT1G61900.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT1G61900.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30700.1); Has 65 Blast hits to 65 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL09-67-C15 introduced

  • F29848 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

7 mutant lines found