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Full-length cDNAs
RAFL09-67-K21

RAFL09-67-K21

RIKEN Arabidopsis Full-length cDNAs

ACTCTTCTCC ATTTTCTTCT CTTCTTCTCT TCTTTGTCCA TTTTTTGACA 
GATATGGCGA TCTGGTTTGC TAGATCCAAA ACCCTTGTTT CTAGCTTGAG 
ACATAATCTA AATTTGTCGA CAATTCTCAT AAAACGTGAT TACTCTCATC 
GTCCCATCTT CTATACAACT TCTCAGTTAT CTTCAACGGC GTATTTGAGT 
CCCTTCGGTA GCCTCCGTCA TGAGTCTACG GCCGTGGAGA CACAGGCTGA 
TCATTTGGTT CAGCAGATTG ATGAAGTCGA TGCCCAGGAA CTGGATTTCC 
CAGGAGGCAA AGTCGGTTAC ACATCGGAGA TGAAATTCAT ACCGGAATCA 
TCTTCAAGGA GGATTCCATG TTACCGGGTT CTTGACGAAG ACGGACGAAT 
CATCCCCGAT AGCGATTTTA TTCCGGTGAG TGAGAAACTC GCTGTTAGAA 
TGTACGAACA AATGGCGACG CTACAAGTAA TGGATCACAT CTTCTACGAA 
GCTCAACGTC AAGGAAGAAT ATCTTTTTAT CTTACTTCCG TCGGAGAAGA 
AGCCATTAAC ATCGCTTCAG CAGCTGCTCT CAGTCCTGAC GACGTCGTTT 
TACCTCAGTA CCGAGAACCT GGAGTTCTTT TGTGGCGTGG CTTCACGTTG 
GAGGAGTTTG CTAATCAGTG TTTTGGGAAC AAAGCTGATT ATGGCAAAGG 
CAGACAAATG CCAATTCATT ACGGTTCCAA TCGTCTTAAT TACTTCACTA 
TCTCCTCTCC AATTGCCACG CAACTTCCTC AAGCTGCTGG AGTTGGTTAT 
TCTTTGAAAA TGGACAAGAA GAATGCTTGT ACTGTTACAT TCATCGGAGA 
TGGTGGCACA AGCGAGGGAG ATTTTCACGC CGGATTGAAT TTTGCGGCCG 
TAATGGAAGC TCCGGTTGTG TTTATATGTC GGAACAACGG TTGGGCGATT 
AGTACTCATA TCTCAGAACA GTTTAGAAGT GATGGAATAG TTGTGAAAGG 
TCAAGCTTAC GGTATCCGAA GCATCCGTGT GGACGGTAAC GATGCACTTG 
CGGTTTATAG TGCTGTACGC TCAGCTCGAG AAATGGCTGT AACAGAACAA 
AGACCTGTTC TCATTGAGAT GATGACATAT AGAGTAGGAC ATCATTCTAC 
ATCAGATGAT TCAACTAAGT ACAGGGCGGC GGATGAAATC CAGTACTGGA 
AAATGTCGAG AAACCCTGTG AATAGATTTC GGAAATGGGT CGAAGATAAC 
GGATGGTGGA GTGAGGAAGA TGAATCCAAG CTAAGATCTA ACGCAAGAAA 
ACAGCTTCTG CAAGCGATTC AGGCTGCGGA GAAGTGGGAG AAACAACCAT 
TGACAGAGTT GTTTAACGAT GTATATGATG TTAAACCGAA GAACCTAGAA 
GAGCAAGAAC TTGGTTTGAA GGAATTAGTA AAGAAACAAC CTCAAGATTA 
TCCTCCTGGC TTTCATGTTT GAATCTAGAG GAACTGTGTG GTTAAAATAC 
CTCATATAGT ATCATGTCCA TATCGACTTC TCATTGCAGA CTATTTATAT 
TGTCCACGTA TCGAATAGTA ATCAAGTATC AATGTAGAGA CCAGCATTTG 
GAGCATCATG AAATGGCCTT GAGAATGTTA TTTTCATGGT CCGGCTGACC 
CTTAACCGGT TCAAACTGGA GTAAATGAGT GAATGTTAAT GCTCGAGAAT 
GGGTGAGGCT CCGTTAATCG TTAAGAAAAA AACGTGCCTA CCTAGCCAAA 
TGACATCTTC CTCTTTTGTG TTTAGCACAA GTGAATGATC CAAATATCAT 
CTACCTAATA TGACCCATAA AATAGTATGT GATTGTCTTT GGATGTTATC 
CCATAACATA ACTTAAATTT GGGATGCATG CATATATTAT ATACTTCATA 
TAAAATGAGT GGACCTCATA AGTTGCGGTT TCGATTTTTA T

Gene models with high sequence identity

AT1G21400.1 [+] show detail - Thiamin diphosphate-binding fold (THDP-binding) superfamily protein
E-value: 0; Score: 100.00

InterPro Scan Digest

Program	Description	E-value
Coil	coiled-coil	0
HMMPfam	Dehydrogenase, E1 component	2.8e-96
Gene3D	no description	5.9e-137
superfamily	Thiamin diphosphate-binding fold (THDP-bindin	4.9e-110
HMMPanther	2-OXOISOVALERATE DEHYDROGENASE ALPHA SUBUNIT-	1e-225
HMMPanther	PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SU	1e-225

See the detailed result >

AT1G21400.1

Model type: Protein coding
Short Description: Thiamin diphosphate-binding fold (THDP-binding) superfamily protein
Computational Description: Thiamin diphosphate-binding fold (THDP-binding) superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity; INVOLVED IN: metabolic process; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Dehydrogenase, E1 component (InterPro:IPR001017); BEST Arabidopsis thaliana protein match is: Thiamin diphosphate-binding fold (THDP-binding) superfamily protein (TAIR:AT5G09300.1); Has 9510 Blast hits to 9506 proteins in 1925 species: Archae - 124; Bacteria - 6142; Metazoa - 513; Fungi - 243; Plants - 187; Viruses - 0; Other Eukaryotes - 2301 (source: NCBI BLink).
Link: InterPro Scan - TAIR

Mutant lines with RAFL09-67-K21 introduced

F10431 - Specific phenotypes were NOT observed.
F12210 - Specific phenotypes were NOT observed.
F20946 - seed::increased size / seed::increased length
F28113 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

6 mutant lines found