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  3. RAFL09-69-J01

RAFL09-69-J01

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda06663)

full reading [+] show sequence

Nucleotide sequence: RAFL09-69-J01 - full reading 
GTCTGGTTTG AAATCAGAAT TTTAAAAAAA TTGAACAAAT TAAAAAGAAA 
AGAAAAATCT CGTTGTTGAG AAGAAGAACA TCTTCCCCAC TCTCTCCCTT 
CTTCTTCTTC TTCTTCAACT CAAAAAACTT CTCTCTCTCT CTCTCTCTCT 
CTCTGAATCA ATTAAAAAAC GGTTTTGGGT TCTTGTCCTC TGTTCTCTAG 
TGGCTTCTAT TATTCTCATT GGTGGCTGTT CCAGCTCTCT TAAGGTCTCC 
TTAGTGTGAT CTCAGATCTG ATTGGTCCGA TTCTATTTTT CTTTTTATTT 
TGGAGATAAT TTGTTGTTGT GCAAGTTCAG ACACGAGACC CAGAAAATTT 
CAATCTCAGC TTTCGTCAAT GTTGACCCAC GACAGAGATG AAGAACTCTC 
TCTGTTCCTT GAGATGCGTC GTCGCGAGAA AGAACATAGA GCAGATTCTC 
TTTTAACAGG ATCTGATAAT GTTAGTATCA ACGCAACGTT GACGGCTGCG 
GCGGCGGCTG CTCTCTCTGG TGTCTCCGAA ACGGCGTCGT CTCAACGTTA 
TCCTCTCAGG AGAACCGCTG CTGAGAACTT TCTATATTCG GAGAATGAGA 
AGTCTGATTA CGATTGGCTG CTAACACCTC CAGGCACGCC ACAGTTCGAG 
AAAGAGTCAC ATAGAAGTGT AATGAATCAG CACGATGCTC CCAATTCCCG 
ACCCACGGTT CTTAAATCTC GGCTAGGGAA CTGTCGTGAA GATATCGTCT 
CAGGGAACAA TAATAAGCCC CAAACAAGCT CTTCCTCTGT AGCTGGACTC 
AGAAGACCAT CTTCTTCTGG TAGCTCAAGG TCAACGAGCA GACCTGCCAC 
ACCAACCAGA AGGTCTACAA CTCCAACCAC CTCCACATCA AGGCCCGTGA 
CCACCAGAGC TTCAAATTCT AGATCCTCAA CACCCACCTC ACGTGCCACC 
TTAACTGCTG CACGTGCTAC TACATCTACA GCAGCTCCAC GAACCACTAC 
TACTTCAAGC GGTTCAGCGA GATCAGCTAC TCCAACTCGG TCTAATCCTC 
GACCGTCTTC TGCATCTTCA AAAAAGCCAG TGTCAAGGCC AGCCACACCA 
ACCCGCAGGC CTTCAACCCC GACCGGTCCA TCAATAGTTT CGAGTAAGGC 
TCCGTCGCGA GGGACTTCTC CTTCTCCTAC TGTGAATTCG TTGAGTAAGG 
CTCCGTCCCG AGGGACTTCT CCTTCTCCTA CTTTGAATTC GTCGAGGCCG 
TGGAAACCAC CAGAGATGCC TGGTTTCTCT TTAGAAGCTC CACCGAATCT 
GAGGACGACT TTAGCAGACA GACCGGTCTC AGCTTCAAGA GGCAGACCTG 
GAGTAGCCTC AGCACCAGGT TCAAGATCTG GTTCCATAGA ACGCGGAGGT 
GGCCCCACCA GCGGCGGCAG CGGAAATGCA AGAAGGCAAT CTTGTTCGCC 
GTCCAGAGGT CGGGCTCCTA TCGGGAACAC CAACGGGAGT CTCACTGGTG 
TGCGTGGGCG AGCAAAGGCA AGCAACGGCG GAAGTGGCTG TGATAACTTG 
AGCCCAGTGG CTATGGGTAA TAAAATGGTT GAGAGAGTGG TGAACATGAG 
GAAACTAGGT CCACCGCGGC TAACCGAGAA TGGTGGTCGA GGATCGGGGA 
AATCTAGCTC AGCTTTTAAC AGCCTTGGAT ATGGTAGAAA CCTCTCCAAA 
AGCTCAATCG ATATGGCCAT AAGACATATG GATATAAGAC GAGGCATGAC 
TGGAAACCTC CGGCCGCTTG TGACAAAAGT TCCGGCATCA TCAATGTACA 
GTGTGAGAAG TCGGCCGGGT AGTGTCTCAA GCTCTCCGGT GGCCACGAGC 
AGCACTGTGA GCTCATCTGA CCCGAGTGTT GACAACATCA ACATTCTGTG 
CTTAGACGGA AACGAAGCCG AAAATGATGA TCTTCTTAGT GAAAGAAGCT 
ATGCTGCTTC TCCGCGGAAC CAGTACCCCA AGTTCACATC TTGACCCATA 
TTATTATGTA ATCTGTGTTC TTGTTTTTTG TTCTCACGCT TCGAAGCAAC 
TTGTTTCTAA GTGATCAACC GTATAATCTA TAAACCTCAG GCATCAAATG 
TCTTTTTTCC TTCATG

Gene models with high sequence identity

  1. AT3G09000.1 [+] show detail - proline-rich family protein
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT3G09000.1

Model type
Protein coding
Short Description
proline-rich family protein
Computational Description
proline-rich family protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40070.1); Has 72642 Blast hits to 41597 proteins in 1862 species: Archae - 219; Bacteria - 10073; Metazoa - 26321; Fungi - 16532; Plants - 3439; Viruses - 1862; Other Eukaryotes - 14196 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL09-69-J01 introduced

  • F06009 - seed::increased size / seed::increased length
  • F07233 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

8 mutant lines found