1. Home
  2. Full-length cDNAs
  3. RAFL09-69-M23

RAFL09-69-M23

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda08694)

full reading [+] show sequence

Nucleotide sequence: RAFL09-69-M23 - full reading
CTCCTCAAAC TCCTAAAAAT GCTAAAACCC ACAGCTCTAT GAAATCATTT 
CCGCCATTAC AATCACGCAT GAAACATCTC CTTGCTCTAC TCATTCCTTG
AGATAATCAT GCAATTCGGA TCTTCCAAAA CCCTCTTCTT CCGCGTCGCC
GGTTTCTCTT CCACCTCCGT CTTCAAGCCG CGTCGCGCGA TCTCTGTTCC
GGTCGGAAAT TTTTCTTCTT CTAGCTCGAT TTCCGCTCAC TACACTTCTT
TGAAGCGTTC TCAATACGAG GAAGATTCAC GGAGTGTTAG GGTCCCTGTA
TGGTGGGATT TTGAGAACTG CCATTTGCCG TCGGGTGCAA ATGTCTTCAA
ATTGGCTCAA ACCATCACAT CCGCCGTTAG AATCTGTGGA ATCAAAGGAC
CCATCACCAT CACTGCCTAC GGAGACATGA TCCAGCTCTC CAGAACTAAC
CAAGAAGCTC TCTTCGCTAC TGGAATCAAT CTCACCCATG TCCCTCAAGG
TGGGAAGAAC AGTACGGATA GATCTTTGAT AACAGAAATA ATGTGTTGGG
TTTCACAGAA TCCACCTCCA GCTCATCTCT TCCTTATCTC TAGTGATAGC
GATTTCGCGA ATGTGCTACA TAGATTGAGG ATGAGGAATT ACAACATTTT
GCTCGCGTGC TACGAAGAAA CGACGCTTGG TATATTGTGC AGTGCTGCTT
CGATTATGTG GGATTGGGAT GCTTTAGTTA GAGGGCAAAA TCCAACTGCT
AAACATTTTA ATCAGCCACC TGATGGTCCT TATCATTCTT GGTATGGTCA
CTATACAACT CCTCTTCTTG ACCCATTTGC CACATCTACC AATAATAAGC
AGATATCTTC TACTAGTGTC AAAACCGTAG AGTTGCTCGA ATTGGGTTCT
TCTAAGTCTC GTCGTCCTAT TCCGAATAAA GTTGTTAAGC AGATTGGTTT
GATATTGAGG TGGTATCCTA AGGGAGCAGC CATTACAGAA CTCCGTGAGC
AGCTGCGAAA GAGGAAAGTA CTGTTAGATA GAGACTTTTA CGGATATAAG
AGTTTTTCGA GGTTTCTGTT ATCTATGCGG AATATCTTAC AGGTTGTTCC
TCTGGGAGAT GGTATGTTTT CTATTCATGC TGTTACCCAG GGAATGGATA
ATAAAGCCTT ATTGCCAAAA GTAAGTTGCG AGAATCATGC AGTTGTTAGT
GTGGAAAAGA TGTGTCAGAA TATGAAACAG AATGATAAAG ATGTCAAAGA
GGAATCTCAT CAATTACAAG AGAGTTCTCA AGAGTTTGTT CAGGTAATGA
AGCTGATGGA TGTTAAGGCA AAAGAGGAAC CAGTTAAAGC AAATCAGCTA
GCTATAACTG CTGTTGATGA TGTTTCTTCT TTCGAGGAAA AAGACGGATT
TCTTAAGAAG CTAAATAGAC TATTGTTTGG TTCACCTGAA ATGGAATTAG
AGCATCTCCA AGAAAGGAAA CATATTTCCG GAAATGGAGT TCTTGGTGAA
GGAAAAGTGG TGGATAAGGA CTTAGAATCT CAAATTGCAT CTTCTACCTC
TAGTGAATCT GCTGAGGAGG TAAAAGTAGA CAATGCAGTA GGCAACGGGA
AATCTAAGAG TCCAGGGCTT ACATGTCGAC TTCTGAAGAG ATTCAAGTTT
TCTTGGGGAA GATATACAGA GCTTAGCAAT GCAGCAGCAA CCGGACCTCA
AGTTGATGAC GTTTTTGTTA AAGATTCTTT TTGGAATGAT GTTGAATCTT
TCATTAATTC TCCAAGAGGC TTCGTCGCTG TTTCTCACTC AAGATCAAGA
GAAACAATGG CTAAGAATCT TAAGGAAGAA GGACCTTCAT CACTCAAACC
GCTCGATGTA CCAAAAATGC TTGATTTAAT ATCTATGTTA ATATCAGAGA
AGAAATGGAT CCAAGAGAAT CCTTCGGATG CTCTACCTTT TAGAGTAACT
CGGTTCACTG AGGAAAGCTC TTGTCGTAGC AACCCTCGCA CCACGGATGG
ATTGAGAGCG ATATTTGTGA ATATGTCAGA ATCGCTGTGT GACGGAGCAA
ATGGTGATAA AAATTCCACC AACGTTGGTA TGAGCCAGAA ACCTAAAGAA
AGATCGAGAA GCAAGGTAAT TGCGGATTGT CATAAGCTGA TAAAGAAGAT
AACAGAGGAA AACGCTGGAG GTTATAGCAT AACTAAATTC AAGAAAGCCT
TTTTGGAGAA ATTTGGATAC CGTTTAGAAT ATCGTAAATT CGGTTTTTCG
AAACTGCAGT CTTTGATAGA AATGATGCCC GAGGCTAGGA TTGAATCAGG
GCACATTGTT ACTTCGTCAA CCCCGGTTCC ATGTGAATCT GATTCATCAT
TCGAAGATCT CGGTCCAGTT TCCAAAAAGA TTCATGAGAA TGAGTCATCT
GTTTCAGAGG GAGAAGATTA TGACTCAGAG ATGGAGGAAA AAGCTTCTTC
AAAACAGAGC GGTGGGGAAA GGAAGAAGAA AGAAGATGAA ACAGAGAGTG
ATTTACTTCA AATTCTGGGT TCTTGGGACA CTGATAAGAA GCCTGCAAAA
ACTTTTGGTG AAGATAAGCT TGTTGAGGGA ATATTGATGA GCTTGAGGAA
GAAACCATCA GGTGACTCTA GGATTCAAGA TTGAAGATGT TTAATTTAAC
CGGGAAACAA ACAACGGTAG GCTAAAGATT CCGGTTTATT ATATTAGTTT
TTGGTGGAGC TTCGGTTTGG CGATTGGTTC TATGTAAAAA CCGTGGTAAT
TGACCAAAAC GATTTTAAAT C

Gene models with high sequence identity

  1. AT5G64710.1 [+] show detail - Putative endonuclease or glycosyl hydrolase
    E-value: 0; Score: 99.96

 

InterPro Scan Digest

See the detailed result >

AT5G64710.1

Model type
Protein coding
Short Description
Putative endonuclease or glycosyl hydrolase
Computational Description
Putative endonuclease or glycosyl hydrolase; BEST Arabidopsis thaliana protein match is: Putative endonuclease or glycosyl hydrolase (TAIR:AT5G09840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL09-69-M23 introduced

  • F09629 - Specific phenotypes were NOT observed.
  • F22036 - Specific phenotypes were NOT observed.
  • F25734 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

4 mutant lines found