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  3. RAFL09-70-N12

RAFL09-70-N12

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda08704)

full reading [+] show sequence

Nucleotide sequence: RAFL09-70-N12 - full reading 
AACTTGTTAA TCAGTAAGAG CGTCTCAATT TCAGTGTTTC ATCGAATATG 
CTGAGGGTTT CGACAATCTG AGATTCTTCT CCTTGTGTTC ATGTCCAAAG 
GAGATTCCTT TCTTCATTCT CCTTACCTTC TTAACAAACC CTTCTCTCTT 
ATTATCTAAT TCGCTTTTGT AGCTCTATAC GCAATTAGCA AATTTGGAGA 
AATCTCGATT ATAGCAATTT TCTTCAGTCT CCATGTACTT TTCCTCTGTA 
TTACTCTAAT TCAAATGTAT AAGATGTGCC ATGAACCTAC CAACATCTCT 
TCATCGGAGT CTGATTTTAC ATTCCTTGAG GAAGACCATC TCCCCTTGAC 
GTCACGGCGG AGTTTATTGC TATCGAGTGA AAGAGTCTCT CAACGTATCG 
CTGCTTATGT TCCTGCATCG AATGTTGATA GTGTCTTGAA AAGAGAAGAA 
GAAGATTGCT TCAATGAGCT GGGTTGCTAT AAGGTTGCCT GAATCTAACG 
TAGAGGATAA TACTGAAGAT TGCGATGAAA CTGAACTTTA TAAAATAAAA 
GCGGAGATTT CATGCGAAAA TGGGATAGCT TCGTCTTCTG GAGTCCAATT 
CAGCGGCTTT CTAGAGAAAA TTGATTCTGT CCTCTGTAGA AATTTTAGTA 
TATGTTCAGA ATCTGGAAGT CAGCTTGGTG GAATTCAAGA GAGTGATATT 
CCAATATCTC CTGAACGGTC CTTTGATTTG TCACCTGAAG CCAGTCTACC 
TGAGGTATCC AGCAGCAACA AAAATCCAAG AAAAAGAGTG AAAAGAGTCC 
AAAGGAATCC TCTACCTTTG AATGAGAATG AAATACAGTC TACTCAAGTA 
AAGGTTGATC CTTTGGCTGA TTGCGTCATG GAGGACAATG ACGAGAAAAA 
TCCTGTTACC TCAAAGCAGA TACCGGTCAA AAGAGAGGTA GAAACCCATG 
GTGAAGCTCT TGATGAAAAT GAGCTAGATT CTGTGAAACT GAGCTTTCGC 
TTGAATCGTT GTACATCTGC TCCTACACCT TTTAGGTGTA TGAAAAACGA 
AGCGGAGACC GCTAGTGAAA TGGATGAAGA TATTATAGAC CACATGAAAT 
TAATTGATCG ATTAAAGCTT CGATCTTTTC ATGGCTCAGG TCATCATGAA 
GATCTTAATT CACCGTCCTC AGGGTTTAGC TTCTGTACAT CTGATGAGTA 
CGTTAAACCT TCGAGGGTAT TTCGTCCTTG GAAGCGGAAG AAAACCGCCA 
CGGACTCAAT TGAGACAGCT TTGGAGGAAG ATGCTCCTGG TCTTTTGCAG 
GTACTGATTC AACAAGGGGT AACAGTTGAT GAACTTAGGC TTTATGGGAA 
TGAAGGTGGC GATGTTCCCT CAGATGATTC ACTTCTCAAT GAGAGTTTCT 
CGGAGCTCGA AGATGTGATC TCGCAGCTTT TCTACAAACG CGAGACGGGC 
ACGAAACTAC TTAATTCAAG TTTCTCAAAA GCTTCAAGAA CTAGCTATTG 
CTTGACCTGT CTATTCTCCC TCATCGAACA GGCGCGGTAT TTGCAGTTCC 
GCAAATGGCC TGTTGAGTGG GGCTGGTGCC GCGATCTCCA GTCTTTCATA 
TTCGTTTTCG AGAGACATAA CCGTATAGTA ATGGAACGGC CTGAATATGG 
CTACGCAACA TACTTCTTCG AGCTCAGCAA TACTGCATCA ATCAGATGGC 
AGGTCAAACG GTTAGTCTTG GCCATGAAAC TAGCAAGTTG TGGCCGATAT 
CAGCTGATTG AAAACAAGCC GTTACTGGTA GGAGAAGATA TGACTGCAGG 
CGAAGCAGAA GTTCTGATTA AGTATGGCTG GGTTGCAAAC ACGGGACTAG 
GGACGATGCT AAACTACCGC GATAGAGTCT ACCACGACAG GAAGACCCAA 
AAACCGACAT CAGAATGGAG ATCTAAGATT TCTGAGCTTC TTATTGATGG 
CTATAACAGT GGAACCATCG TCTCTACTCT AATTGCACCT CATGATGATG 
ATATTGATGA CGCCGGACTT GACATGGAAG ATGTTAAGCT TGAGCCTTAT 
TGAAGCTGTG AATCTGTTAT AGAGTCTTCT TCAACTGTTG ATTGTTTATT 
TACTTGGTCA GCTAAATTTA ATCGGATCAC AAACTACAAT AAGCGAAAAA 
ATTTCCC

Gene models with high sequence identity

  1. AT5G16610.1 [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1...
    E-value: 0; Score: 99.95

 

InterPro Scan Digest

See the detailed result >

AT5G16610.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL09-70-N12 introduced

  • F00550 - Specific phenotypes were NOT observed.
  • F08738 - Specific phenotypes were NOT observed.
  • F09001 - seed::increased size / seed::increased length
  • F10131 - Specific phenotypes were NOT observed.
  • F15934 - Specific phenotypes were NOT observed.
  • F18337 - Specific phenotypes were NOT observed.
  • F27634 - Specific phenotypes were NOT observed.
  • F30001 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

9 mutant lines found