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RAFL09-79-I17

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda08822)

full reading [+] show sequence

Nucleotide sequence: RAFL09-79-I17 - full reading 
ATCACTTTTT AACCCTTTTC GGCTTCTATC CGTCGATTCA AATCGGCGGC 
AGTTCCCAGC GACATTAATC TCCGGCGAGA CAGTTTACTC GTGTTTATTG 
AAGCTATGCC TAAAAGAACA GCAGAAGCGT GTCCATCATC TGAAATCCAA 
AGAAGCAGAG GAGATACTTT TGGTAGTTAC AGATCTCAAG TAGCTGAGCT 
TTTGTCTCTA GGTGAGAGGA TCTCACATCA TGATCAACAA GAAGCCAATG 
AGAGGCATTC TGAGAGTGTT ATAGGAGCTG GGATGTCAAA TGTTGAGAAA 
GATAATTTGA ATGTTTTGTT AAGGCAGTGT GTGAGGAATC TAAGTCCAGA 
AGTTGATGAG ATGCAGGAAT GTGTACGCTC TCTGTATCTA ATTTCTCAGC 
TAGGGAACAA ATGTCAGTCA TCGTCGCCGA GCGATTTTGT TCCTGAAGAA 
ACCGGAGGAG CGAGAGAAGA TGATATTCAA CTACTTCTGA GGTCTGACTC 
TGATATGGTC AAGAACATAA CGTCACAGTA TTCAAATGTT CTGCTGTCCA 
AACTGGACAA TATGCAGCAG GAACTCGAGA GACTTCTTGA CGATGTGGTG 
GCGACTTGCA GACCTATGAC TCGTGGTGAA ATTCGGGAGC TTCAGAAATC 
GATCAAGGAG CTGCCTGAGA GGAATCTCAA CCGCGTCGCT GAAATAGTAG 
GAAATCATTG CATAGCATCT GGCAGAGATT TCAACGATAA GGTTATCGTC 
AACCTTGATC AGGCGGACAA GGTCATGTTA TGGAGATTGC ATTTCTATGT 
AGGAGCAGTC AAGAGGCCCA GAAGCTCGCT CCCTAGCTAA CTTTGGCTGT 
ATATATATGG ACTGGGATGT TGAGATGGTG TGATGGGCTA AACCGGTTTA 
ATATATTTCC TACTTTTTTT GTTTTCCTGA TTAGTCCGGT TAAGCCGTGT 
AGTAGTTGGT CTTACATGGA CGGTTAACAA ATGAAAATCG GTTCTGATTT 
GG

Gene models with high sequence identity

  1. AT3G27420.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40600.1); ...
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT3G27420.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40600.1); Has 43 Blast hits to 43 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL09-79-I17 introduced

  • F06403 - Specific phenotypes were NOT observed.
  • F14929 - Specific phenotypes were NOT observed.
  • F15824 - Specific phenotypes were NOT observed.
  • F18640 - Specific phenotypes were NOT observed.
  • F29748 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

6 mutant lines found