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Full-length cDNAs
RAFL09-81-E19

RAFL09-81-E19

RIKEN Arabidopsis Full-length cDNAs

TGACACATCT AAATTTTTCT CCATATTACA AAAGAACTAA AGAAGATGGA 
TCAGTCATCA TCAACGTTGC TCATAAACCA GAGAAAGTCA TCATCGTCTC 
CGACTAGGAT CCCACCTAAG CAGAAGAGGA AGTCAACGAC TACGCACAAA 
CCCATCAAAG TCCGTTACAT ATCAAATCCG ATGAGAGTCG AGACTTGTCC 
TTCTAAGTTC AGAGAGCTTG TTCAAGAACT CACCGGTCAA GACGCCGCTG 
ATCTACCACC GTCGCCCACC ACTTTTACCG CCGTAGATCT CCACCGTCCG 
TGTGAGTCGG AGATGAACTT AGAGCCGTTG GATGGAGAGG TCCGTGGAGA 
GTATTATTCA CCGTTGGATG AGGAAGTGTT TAATGCTCCT CAGATGTCGG 
CAGGTCTTTC TGGTTTTTTC TCGTCTGGAT TTTACAATGT TAACGCTTTA 
GGAAGCATTG GTTCTCTCTG AATTTTAAAC TATGAATGTT TTGTTTCGGC 
ACTGAAACAC CGATCACGAA GAATAAACCA TCTATAGTTT TAGGGTTTTC 
ATCAAAACCT ATATATGGAT ATATTACATA TATAGTTTTT TTTCTCGCGA 
ATTATTTACG TTTGTGAGTA TATATAGAAA TCTTTCATTT GTTTGTGGTT 
TTTTTATTTT ATAATAATAA TCAAACCGTA TTAGTTTTAG TTGGGTTTAT 
TGGTGTAGTT ATGTAATAAT TAACCTCAAA ATCCCAATTT GGTGGT

Gene models with high sequence identity

AT2G41180.1 [+] show detail - VQ motif-containing protein
E-value: 0; Score: 100.00

InterPro Scan Digest

See the detailed result >

AT2G41180.1

Model type: Protein coding
Short Description: VQ motif-containing protein
Computational Description: VQ motif-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889); BEST Arabidopsis thaliana protein match is: sigma factor binding protein 1 (TAIR:AT3G56710.1); Has 49 Blast hits to 49 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

Mutant lines with RAFL09-81-E19 introduced

F11416 - seed::increased size / seed::increased length
F22606 - Specific phenotypes were NOT observed.
F30306 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

5 mutant lines found