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  3. RAFL09-82-H05

RAFL09-82-H05

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda08875)

full reading [+] show sequence

Nucleotide sequence: RAFL09-82-H05 - full reading 
AAAAAGAAAA AAATTATCAG ACTTTCAGAA GAAGAAAAAA CGAAGGAGAA 
GAAGAACAAT TTCGCGGATT CAAGAGACAG AGAGCTTCTT CTGCGTAAAG 
TTTGATCCTT TGAAAATGAC GGAAGAACCA GAGAAGGTGT CTTCTTCAGT 
ATTACATCAA CCTTCTGGTG ATAAGAAACC TGAAGATGTT GGGATCAAAC 
CTCAGGATCC AGCGTCTTCT TCTGGGTTTC GAGCTTATCC TAATGGTGAT 
TCTCCAATGT ACCCGGTTTT TTATCCGGGT CTTGTTCCCG GATCCAATCC 
TGTACAGTAC GAGGAACAAA TGAACCGTGG AGCTGGGATC TATGCGGTTC 
CTGTTCATCA ATTTGGAGGA CATGTCGCTG GTCTTCCCTC AAATTATCTT 
ATCCCTCTCA CTTACAATGT TCCAACGACT AGACCAAATA ATGAAGCTGA 
GACTGGGGGA GAGAATCAAG CGCAAGCTGG GCAGGGTCAG CAGCAGCAGC 
TACCTGCAAA TCAAAGGCAT GTTGTGGAAA GGAGATTTCA GATCGCGTTT 
CAGCTTGATT TGTTTCTCAT ACTCAAGCTT GCTGCTGTTA TCTTTTTGTT 
CAACCAAGAT GGATCAAGAC AAAGGCTTGC TGTTCTTGTG ATTTTCGCTA 
CCATAATTTA CTTATACCAA ACTGGAGCTC TTGCACCGTT TGTGCGATGG 
CTCTCACAAG GTATGCATAG AGCAGCAGTA CCACCTGCTC GACCACATAG 
ACCTGCTGTT AGAGCTGATA ATGATCCCGC AGCTGCAGTT CCACTAAACG 
AAAATGCTGT TCTCGAGGGA GAAGAGAATG AAGCTGATAA CGGTAACCGA 
GCAAGAGCAA ATGCAAATGA AAATGAAAAC GTTGACGCAG GAAACCAAGG 
GAATCAATGG TGGGGGATAG TGAAAGAGAT TCAGATGATA GTGTTCGGCT 
TCATAACTTC ATTACTCCCT GGTTTTCACA ACATAGAGTA GAAGTAGACT 
CTTTTCTGCA TACTTTCATC TTCTGCAACT CAAAAAAAGT GTTGTGTTCT 
ACTTTTAGTC TCCTTCGATC TAATGTGTAA GTACAGAAAA TTTTACCCTT 
CAGACTCCAA AACTTAATGT ATGTGAGCCG CAATTTTTAT GC

Gene models with high sequence identity

  1. AT4G29960.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT4G29960.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL09-82-H05 introduced

  • F16319 - Specific phenotypes were NOT observed.
  • F17137 - Specific phenotypes were NOT observed.
  • F30323 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

5 mutant lines found