1. Home
  2. Full-length cDNAs
  3. RAFL09-83-C03

RAFL09-83-C03

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda17861)

full reading [+] show sequence

Nucleotide sequence: RAFL09-83-C03 - full reading 
CCGCGCTTCA ATTCTAAATC TCCCGGCGAA GAAAATTACC GGCAAATTTC 
ACGGAGAAAC CTCGCCAACG AAGCGGAGTT ATGGCGGGCA TGGCTGCGGT 
GGCAGGATTA CGACCGTGGA ACGCTTTTAT TCAAGCTCTA GTTCTGATAT 
CTCTATCATT TCCCTTTCTC TCCAGCGCTT ACCGACCTGG AGATATCGTC 
CGGATGAGCA AGATGGGGCA GTATCACTCT TCGAGAACGA CTTGGCATGA 
TGTGATCGGA AAGCATTGCC CGATCTTCGC CGTCAATCGC GAGGTGTTGA 
TCCCAATAGC GAAACCAATT GGCTACACAG GAACTGATCC TTATAAGATA 
AAATTCCAAG TTGGAAGTGA GAAATTTCTG ATTCACTGGC TTTTGGTAAT 
TAATCGTAAG AGCTCAGAAG TTCCGATGAT CGATGTAAAT TTGAGATATT 
CTGGAGGAGA TCTGCTTGGA GTCACAGCTC AAGTTATCGA CATGCCTCAT 
AGCTATCTGA ATACACACCC GGAGATCCGC AAACAGTTTT GGGATCCTCA 
ACACTGGCCA AAACATGTTC TTGTTAGATA CACATGGAAG GAGCAGTCAG 
AGATTGATGT ATCCTCAGGA TTCTATGTCC TGTTTGGCTC AGCTCTCACA 
TTTTCTTTTG TACTCTCCAT TTACGTCTTA CAATCGTCAC GAGAGAAGCT 
GGCAAGGTTT GTAAGAGAGA CGGTGGTGGA GAGCAGCAGC ATGAATGTTG 
GAGAATTTGG CAAGGGGGAT TGAGTCACAT AGTCAAGTAT ATGTATGTTT 
CTACAATTTT AGATACTTGG AATATGGAAT TGGCCGTTCA ACTCTCAGAA 
AAGATTTTTC ATCAAACATG AATAGTCGAA AGCAAAAACT TTGTCCTTGT 
AACATTATGG TTTAATAGAT TTACGTTTCT TAAAAGAAAA A

Gene models with high sequence identity

  1. AT3G51610.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative str...
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT3G51610.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 53 Blast hits to 53 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL09-83-C03 introduced

  • F08742 - seed::increased size / seed::increased length
  • F11618 - Specific phenotypes were NOT observed.
  • F15826 - Specific phenotypes were NOT observed.
  • F16047 - Specific phenotypes were NOT observed.
  • F19416 - Specific phenotypes were NOT observed.
  • F22436 - rosette leaf::abnormal / cauline leaf::increased size / whole plant::decreased height / fruit::decreased length
  • F29803 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

7 mutant lines found