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  3. RAFL09-83-M03

RAFL09-83-M03

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda17864)

full reading [+] show sequence

Nucleotide sequence: RAFL09-83-M03 - full reading 
GCTCGCTATG GACGCTTGGA TCTCGTCTCT CAGGTTCGGG TCGGGTACGA 
CCCATGTCTT GTGCTTCTTG TAAGCCTCTT CGAACGCCTC GTTGAACCGT 
CTCAGAGACT CCTCCGCCTC CGTCCCCGCC GTTGAATCAC CGGGGAGCGA 
CGCTATCACA TCCCCCCAGG CCATTTTTTC GTATTTCTCG AGGTATTGAT 
TCACTTTAAC CTCGTGATTC GCTACCCAAT CGTCTCCGAG TACGAGTCTG 
AGATTCGATG TACGGACCTT GGTCACAACG TAATGGAGGT TGTTCGCTAG 
GAAGAGATAC GATAGAGCCG AGTCGTTGTA GAGCCGAGAT TTGGCGTCGA 
TTTTACAGAG CAAGACGAGA ATCAACCACG CGAGTCTCGC CGCCATCGGA 
GAACGATCAC CGGATCCTGG ATTCTCTTCG CCGCTGCTAC TGAAGTAATC 
CTCCGGTAAA GGTAACGATG ACTCCTTGAG AATGGTGGCG AGAGAATCGC 
TGTAGTCTGC GAGGAAGACG ATGAAGTTCA TCACATACCT CGTGAGCTGA 
TGAACTCCGC CGCCAGAAAT CGCCGATTTC GACGATTCCT TCGTAATCGA 
CGATTGAAAC TCCGTCATCA TTGCATTCAC CGATTCCGAT AGCTTCTCTA 
GAGATTCATT CGCCTGTAAT CTAACGGCAG CGGTTGAATC GTAGCTAAAA 
ATCTGATCGA TTTTGGGAGT CAGTTGCAAG ATCGTCTGGT AAACGTCAAG 
CGTAGGGAAG ATCTTCTCTG CAGTTTTTCT GGATTTCGCT ACGGTTAGTG 
AGAAGATGAA GAGGTTTAAC GCGCTCTGTA GCGTTATGTC AACGAAGCAA 
GATTCAGCGA CGGAGGAGGA GAAAATGTGA TCGGAAAGGA TTCGTTCTCC 
GTTGAACAGA GTGGTGATTG CTACTCTCGC AACAATCACC CATATTTTGA 
TCTTCTTCTC CAGAATCTCC CATTCCAGTT TCTGCATCTG TGTAGAGAGG 
AGATCATGCA ATTTGCTATC ATCTTCAAAT CAACAATAGC ATCAGAATTC 
CCTCCTCCTC CTATGTCTTT ACCTAATTCC GATGAGGATT CAGAGTAAAG 
CTCTCCATCT GATGAAGAAT CCGAAGCGGT TCCACTTGAT CTCGAAGGTA 
TGTTGGATTC AGAAGACCAA CCAGAGACGG ATTCTGGACT CAGAAAGCGG 
CGATTCGATT TCAAAACCCG GTAAAACTCC TTCTCCAAAT GCTTCATAGC 
TTTCCGCATC AAATCCTGTC CTTTAGCAAG CTTAGCGGAG TCCGGATTCA 
TAGCAACGGT GCTCTGAATG GCGTATTGTA ACTTGCCGAG AACCTCGAGG 
AAGCGTCTGC CTTCTAGGCG GTTTTGAGCG GAGAAGAGGG AAGAGAGGCT 
GCATGAAGAA GAAGAAGAGT CGCAGAGGTG TGGAGTAACC CATTGGCATA 
TGAAGGCGTC AGCTGCCTCC ACACTATCGC CGATTAGAGA CTCGGAGAAG 
CCCTGTTGCT GTTGCGGCCC GACCTTAGAG GATTTTGATA AGGTGGTGGG 
TTTCAAGAGC ACCATTGTTT CTTGGGTTTG AAGAAATGGG TCTTAAGGTG 
TTGGGGTATT TATTTACCAT CTTCGGTTTC TTGTTTCGGC GACTGTTTTT 
TTTTGTTGGA GCCGTTCCAA GTTCGTCAAA ATGTACACGC TGGTCATCCG 
TTTATGTCTC TCATTTTGTT TTCTAAGTCT TTGATTTTGG GACAACAAAT 
AAAAAA

Gene models with high sequence identity

  1. AT1G07728.1 [+] show detail - other RNA
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

Program Description E-value
HMMPanther EXOCYST COMPLEX PROTEIN EXO70 2.8e-134
HMMPanther Exo70 exocyst complex subunit 2.8e-134
HMMPfam Exo70 exocyst complex subunit 9.4e-92

See the detailed result >

AT1G07728.1

Model type
Other RNA
Short Description
other RNA
Curator Summary
Potential natural antisense gene, locus overlaps with AT1G07725
Link
InterPro Scan - TAIR

Mutant lines with RAFL09-83-M03 introduced

  • F01320 - Specific phenotypes were NOT observed.
  • F24841 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

4 mutant lines found