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RAFL09-84-A11

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda08912)

full reading [+] show sequence

Nucleotide sequence: RAFL09-84-A11 - full reading
ATATATCACA GCCATGGTGG TTGTCACTCA CATCTCCACT TCCTTCCACC 
AAATCTCTCC TTCCTTCTTC CATCTCCGTC TTCGTAATCC CTCCACCACT
TCTTCGTCTC GTCCCAAACT CGACGGTGGT TTCGCTTTGT CAATTCGAGC
TTACATAGAG AAACCAAACT CTTTCTCCAC CTTCGCTAAC AAAGTCATCG
GTTCTCTTCC CGTTATCGGA CTCCTCGCTC GAATTATCAG CGATGAAGGC
GGCGTTGGTA GAGATCTCGT CGATTTCGCT GAGTTTAGGA AACGAGTTGG
GAATAAATGT ACTCCTGATG ATTCTAGGGC TTTCTATGAG TTCCAACAGC
GACGAGGCAA GGCAGGTGAG CCTTTGTATG TGCTTCTGTG TTGTTGGGTT
GCTGCAGTAG GTGCAGGTCT TCTCAAATCT GAAGAGATTC TTGAAGGTGT
TACTAGAGTT AGCATTTCCA ATGATCTCGA GTTTGAAGAA CAGAACTTCA
TTGCTTTGAT GACTGAAGCT AGACAGAGAA GAGCAAAGTT GAACATTGAT
GCGCCAACAA TACCGATGGA ACTAAGAGTT GAAAAGGCTC TTGAAGGTAT
TTATGCTTGT TGCTTTCGGA GAGGACTTAT TGAAGAGGAG GATGAGAAGC
TTCTTAAAGT GATGTTAATA GCGGTTTTCC CATCGGTTGA GAAGTCTGAG
ATAGAGAGAA TCATCAAAGA GAAGGCGACA AGGGTTGAGG AAGGAGGAGA
GGAAGAGAAT GTTATGGCGA AACGGTTGCC TAAAGAAGCT ATTCAAATGC
AGATGAAGGA TCTTGAATTC CTTCAACAAC AAAACATAGA GTCTTAACAA
TAGAGGTTGA GATGCCAAAA CATGTTTACT TTTTCAGTAC GGATTATTTT
AAAAAATGCA ATCAACTTTT TTCAGTCATG AGCAAGTAAT TGTTACTGCA
TAGGTTTCGA GATATGGTTG CTTCCTATCA TATCTTTTGA GAACTTGGAT
TGATTCATTC AGTTTTTTAG ATGGTGTTTG CCGTATGGTA GATGTGTGAA
TTTGCTCCAG TACATTGGAA CAACATTTGA AACTATAGGT AATAGAGTTA
TAAACTTAGT TTTCAATAAG ATGTTTTTGT AAGACATTAA AATAATATAG
TCCATCT

Gene models with high sequence identity

  1. AT3G55250.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT3G55250.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 46 Blast hits to 46 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL09-84-A11 introduced

  • F22302 - Specific phenotypes were NOT observed.
  • F22802 - Specific phenotypes were NOT observed.
  • F24817 - seed::increased size / seed::increased length
  • F27723 - Specific phenotypes were NOT observed.
  • F28828 - seed::decreased size

Mutant lines with disrupted or induced

7 mutant lines found