1. Home
  2. Full-length cDNAs
  3. RAFL09-84-A11

RAFL09-84-A11

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda08912)

full reading [+] show sequence

Nucleotide sequence: RAFL09-84-A11 - full reading 
ATATATCACA GCCATGGTGG TTGTCACTCA CATCTCCACT TCCTTCCACC 
AAATCTCTCC TTCCTTCTTC CATCTCCGTC TTCGTAATCC CTCCACCACT 
TCTTCGTCTC GTCCCAAACT CGACGGTGGT TTCGCTTTGT CAATTCGAGC 
TTACATAGAG AAACCAAACT CTTTCTCCAC CTTCGCTAAC AAAGTCATCG 
GTTCTCTTCC CGTTATCGGA CTCCTCGCTC GAATTATCAG CGATGAAGGC 
GGCGTTGGTA GAGATCTCGT CGATTTCGCT GAGTTTAGGA AACGAGTTGG 
GAATAAATGT ACTCCTGATG ATTCTAGGGC TTTCTATGAG TTCCAACAGC 
GACGAGGCAA GGCAGGTGAG CCTTTGTATG TGCTTCTGTG TTGTTGGGTT 
GCTGCAGTAG GTGCAGGTCT TCTCAAATCT GAAGAGATTC TTGAAGGTGT 
TACTAGAGTT AGCATTTCCA ATGATCTCGA GTTTGAAGAA CAGAACTTCA 
TTGCTTTGAT GACTGAAGCT AGACAGAGAA GAGCAAAGTT GAACATTGAT 
GCGCCAACAA TACCGATGGA ACTAAGAGTT GAAAAGGCTC TTGAAGGTAT 
TTATGCTTGT TGCTTTCGGA GAGGACTTAT TGAAGAGGAG GATGAGAAGC 
TTCTTAAAGT GATGTTAATA GCGGTTTTCC CATCGGTTGA GAAGTCTGAG 
ATAGAGAGAA TCATCAAAGA GAAGGCGACA AGGGTTGAGG AAGGAGGAGA 
GGAAGAGAAT GTTATGGCGA AACGGTTGCC TAAAGAAGCT ATTCAAATGC 
AGATGAAGGA TCTTGAATTC CTTCAACAAC AAAACATAGA GTCTTAACAA 
TAGAGGTTGA GATGCCAAAA CATGTTTACT TTTTCAGTAC GGATTATTTT 
AAAAAATGCA ATCAACTTTT TTCAGTCATG AGCAAGTAAT TGTTACTGCA 
TAGGTTTCGA GATATGGTTG CTTCCTATCA TATCTTTTGA GAACTTGGAT 
TGATTCATTC AGTTTTTTAG ATGGTGTTTG CCGTATGGTA GATGTGTGAA 
TTTGCTCCAG TACATTGGAA CAACATTTGA AACTATAGGT AATAGAGTTA 
TAAACTTAGT TTTCAATAAG ATGTTTTTGT AAGACATTAA AATAATATAG 
TCCATCT

Gene models with high sequence identity

  1. AT3G55250.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT3G55250.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 46 Blast hits to 46 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL09-84-A11 introduced

  • F22302 - Specific phenotypes were NOT observed.
  • F22802 - Specific phenotypes were NOT observed.
  • F24817 - seed::increased size / seed::increased length
  • F27723 - Specific phenotypes were NOT observed.
  • F28828 - seed::decreased size

Mutant lines with disrupted or induced

7 mutant lines found