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RAFL09-84-K21

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda08928)

full reading [+] show sequence

Nucleotide sequence: RAFL09-84-K21 - full reading 
AACGCCGGCC TCTCTTTCTC TCTCTCCCCG CTTCTCTCGT CGATCGCTGA 
CCATGGCCAA GGACAAACTC AAGCCTCTTC TCTCCTCTGA TGCTGCAGGT 
GATATCGCTG ATACTCCTCT CCGAGAGAAG AAGCATAAGA AGAAGAGCAA 
GAAGCGAGCT GAACCTGAAC CTGATATACC CTCTACACGA GATTCCGGTC 
TTGATGAAGA TAGAGATGGA GTATTGGTAG ATGATACTCT AAATGAGCCA 
ACGATAGGTG ATAAACTTGA GAGTCTTGAC TTATTAAATG GCGAAAAGGT 
TAACAGTGAG GAGAGTAATA GAGATTCTGC TCCTGGCGAT GATAAGCCTC 
CTACTGCTGC TTCTGTTAAC GTTCTTCTGA GACAAGCATT GCATGCCGAT 
GATCGTTCTC TTCTACTCGA CTGCTTGTAC AACCGAGATG AGCAGGTGAT 
TGCTAATTCG GTTGCTAAGT TGAATTCAGC CGAAGTACTC AAGCTTCTAA 
ATGCCCTTCT ACCAATACTA CAATCAAGGG GTGCTATTTT GGCTTGTACA 
ATTCCATGGA TAAAGAGTCT GTTACTTACT CATTCTAGTG GAATTATGTC 
CCAAGAGTCA TCATTACTCG CTTTAAACAC CATGTATCAG CTCATCGAAT 
CACGGGTTTC AACTATTCAT ACTGCCGTAG AGGTTTCAAG TGGCTTGGAC 
TTGATTGTGG ACGACTTGGA TGAAGAAGAA GATGAAGGTC CCGTGATCTA 
TGAGGACAAG GACAGTGATG AAGACGAAGA AGAAGGAATA GAGGAAGCAA 
TGGAGACAGA TGAAGAGGCA GACGACTCAG CAGATGAAGC TGCTGATGGT 
GTGAATGATT TTGAAGGATT TGACGACATG AGTGATTGAT AAAGCTCCTG 
AAAATGGCAA AAGTTTTGAT TTGTGTGAGG CTGATGTTAG ATGTTAAGAA 
TATGGCTAAA AGGTTCAATC TTTCGTCAAG AAGTCTGTAA TACGTAATGG 
TTATATCGAT ATGAACGAGA CTTTGTGCT

Gene models with high sequence identity

  1. AT1G15420.1 [+] show detail - CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp12 (InterPro:IPR007148); Has 764 Blast h...
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT1G15420.1

Model type
Protein coding
Computational Description
CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp12 (InterPro:IPR007148); Has 764 Blast hits to 656 proteins in 193 species: Archae - 0; Bacteria - 42; Metazoa - 237; Fungi - 154; Plants - 85; Viruses - 23; Other Eukaryotes - 223 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL09-84-K21 introduced

  • F00516 - seed::increased size / seed::increased length
  • F00529 - Specific phenotypes were NOT observed.
  • F04113 - Specific phenotypes were NOT observed.
  • F10704 - Specific phenotypes were NOT observed.
  • F11120 - Specific phenotypes were NOT observed.
  • F11127 - Specific phenotypes were NOT observed.
  • F16125_77 - Specific phenotypes were NOT observed.
  • F19116 - seed::increased size / seed::increased length
  • F21021 - seed::increased size
  • F24716 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

11 mutant lines found