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RAFL09-86-D14

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda08949)

full reading [+] show sequence

Nucleotide sequence: RAFL09-86-D14 - full reading
ACAACTCACC TCAAACAGAC AATTTAATTC CAAAAGATAA AAACAATCAA 
AAGATGAATG CCACAAAGTT TGTTGTGCTT CTCGTGATTG GCATTTTGTG
TGCCATTGTC ACCGCAAGGC AGGTCGAAGA AGTGTCCAAA GAGACCAAAT
TAGGCACCTC TCTTCCAAAA TCTACTAACA AAGGCATTGG AGCTCAGCTT
TCTGCTGCTG GTCTTACTTA CAGCGGCAGC AGTGTCTCTA GCTCTGCTAG
TGCTTTTAAC AATCCCAAAG GTCCAGGGGC CAGTGCATCC GAAAGTGGCT
ACACAAGTAC CATCGGACAA GTCATTGCCA AGGGTCGCAA GGCAAGAGTT
TCTTCTGCAA GTGCTTCTGC CGCTACAGGT GAGGCTGCAG CTGCAGTGAC
TCGCAAAGCT GCTGCTGCAC GTGCAAAGGG TAAGGTAGCT TCCGCATCAA
GGGTGAAGGG TTCCTCTGAG AAGAAGAAGA AGGACCACAA AGGAAAAAAG
GATTGAGCGT GAGGTCATCT CATATTCTCA TGCATGCGAA TTCCTCAAAC
CTATATATAA ATAATATCCT AAAAACTACA AACTCAAAAT CTCTATCTTG
TTCATAAATA AAACCAGAGA TTGTCACCTC TATATATTAT TGTGAAATGC
TACTCATTCT CATGTAATGG CTTTTTTAAA AATAAAATAA ATGCAATAAA
TCTTATACC

Gene models with high sequence identity

  1. AT1G62060.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT1G62060.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G62220.1); Has 386 Blast hits to 125 proteins in 33 species: Archae - 6; Bacteria - 295; Metazoa - 8; Fungi - 17; Plants - 46; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL09-86-D14 introduced

  • F08241 - Specific phenotypes were NOT observed.
  • F13340 - Specific phenotypes were NOT observed.
  • F25410 - rosette leaf::abnormal / stem::decreased thickness / whole plant::decreased height / stem::abnormal / stem::abnormal

Mutant lines with disrupted or induced

3 mutant lines found