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  3. RAFL09-89-M16

RAFL09-89-M16

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda06941)

full reading [+] show sequence

Nucleotide sequence: RAFL09-89-M16 - full reading 
GCTTTTGCCG GCGTCGGATC TCGGCAAAGT CTCCTCCGTA GAAATTATCT 
ATCTGTTGTG GAACTGAAAT CGCTGGATTT TGGGGTTTTC TGGTAAGAGG 
GTCTCCAGGA TGAATCCGGC GAATTTTCAG CCTCCAAATC CTCCGTTCCA 
CTGGGCTCCG ATGTTACCTC CAGACCCGCC TCGTTGTGGT ATGTTTTGGA 
ATACAAAGAA CATAACCGAT CAGCTTAAAC AACTTCAAGA TACGCTTAAC 
CTGGCTAAAT CAATGGAGAA AGAACTGGAA GCATTGAAGA TGATCAAAGA 
CGCCAAAGGT TCTGTGGAAA ATGCAGTACA AGATTCGGGA GTAGAGTATT 
TAGAGGCTAG AAAGATGGAT TTGGGACAGC AGGAAATGCT TTCAGTGGAT 
GCTGCTAACT CCTTGATGTC TACCTTGAGA GCACAGCTTG AGCCTTTTAG 
GTTCGTTGTT GATGAGAATA GTCCATGGGA AGAGAAATCT GCAGCAGTAA 
GATTGACTTG CAAAATGAAG AAATCAATAA GGAACAAACT GTGGAAGAAA 
CGAAAGAGAC GGTGTGCTGC AGAGATGCGT GCTAAGGAGC CTGAAAGATT 
TGAACAAGCT GATCGAGAGG CAGATGAATG GAGGGAAAAG GAAATGGCCA 
AGGACATGGC AAATAGAAAG GTTGATGAGA TGAAGGCAAT TGAGAAGATC 
AAGGCAAAAC GTGAGCGAAA GAGACTAGAA CCCGAGCTTG AACTAGCTCT 
GATTGTTGAG GAAATGCAAG AGTTACGTTC CCTAAGAATT GAAAAACTAA 
AGAAGCAAGG ACATTTCCTT CCCGAAGAAG ATGACAAGTT TTTCGAGAGT 
GTTCGTGCTG CAGTGGAGCA AGAGGAAAAC CAAGCTCAGT CCCTAATCAA 
CACAGAGACC GAAGAGCATG TCATTGCCTC TGAGGAGAAC ACTACTCTCA 
CTACCAGTAA CAAAACCAAC AACGACACAG ATAAAGATAG CAATACTAAT 
GCAGCTTCTT GTGAAAGGAC TATGAAAGCT CCTGACAATG GTTGCGACAA 
TATATCGAAT TTACCAGTCG AGGTCTATCA CTACTACTAC GGAAGTAATA 
TCGACATGGG TAGACTTATT GAGATCAGAA GAGAATGGGA TGCATATCTG 
AGTGCCGGAG GAAGCCGGAT TCCTGGACAC TGGGTCCAGC CGTCGCCACC 
AGCTAATGAG ATTTGGGCTT CTTGTCTTGT TAATACTCCC AAAAGAGATC 
TTAGTTAGTC GCTGTTAGGA TTCTAGGATA CTGGTTTCAT GCAACACCCT 
TTACTCAAGA TTATGCGATT TGGTCATTTG CCTCTGTTTT GAAACAGAAA 
CAGATCACAA GTTTAATAAT CAAGAACAGA ACAAGTCTTT AGCGATATCT 
TAATCCTCGA TGACAACGTC ATTGTAGAAC CAATTCTTAC CACTGGAATT 
CGTGTTTCAC AAGAAAAAAA AAAAAAAA

Gene models with high sequence identity

  1. AT2G46200.1 [+] show detail - unknown protein; Has 2968 Blast hits to 2381 proteins in 310 species: Archae - 16; Bacteria - 188...
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

Program Description E-value
Coil coiled-coil 0
Coil coiled-coil 0

See the detailed result >

AT2G46200.1

Model type
Protein coding
Computational Description
unknown protein; Has 2968 Blast hits to 2381 proteins in 310 species: Archae - 16; Bacteria - 188; Metazoa - 1070; Fungi - 227; Plants - 145; Viruses - 4; Other Eukaryotes - 1318 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL09-89-M16 introduced

  • F30427 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

4 mutant lines found