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RAFL09-96-C10

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda17923)

full reading [+] show sequence

Nucleotide sequence: RAFL09-96-C10 - full reading 
CCGGGGTTAG TAGTTATATA TATGTTGGAG GTGAAAGGAA TAAAATAAAA 
TTTGTTCTAG GTGGATTCTT AAGAAAAAGA AGGAAACGAA AACAGAGGAA 
TAACAATGGC AGGGAGAATA AGCTGCTGTC TAAATCTTCC TCCCCTAGAT 
TCAAATTCTG CACAATCATT AGCTTCACTG CTCAAGACAA CGTCAAAGAT 
CTCTTGTAGG AGAACAGAAA ATGAGACAGA GCCACGGAAA AACAAGTGTT 
CTTTTGTCTT GGGGGTGGCG GCAACTGTCG TAATCGGCGG GATTCAGATC 
AATGATGTTG CATCAGTGGA AGCTGCGGTT GTGAAATCGC CGGTAGAAGA 
GATGGCTGCG GGTGTGGTGC CGCCGCGGAG GTGGAGTGAC AAGAGGACGT 
GTCCGCCTTG GCTTGAGAAC TCGCTAGAGA CCATCGTACC GGAGAATCTT 
CCTCGTCCGT CTGCTCATCG ACGTTTGGAG TTAGCCGGAT TAGCTAAGGG 
TGATGCACCG CCGGTCGGTG TGGTGATGAC ACGTGTCAAC AGGGGTGGTT 
GTTTCTCCGT GTAAATTGGA AGTTCATTAC GTGTAAGGGA GATTGTTAGG 
CAGGTGTAAA AAAAGTCAAT TAGAAACAAA TAATACACAC AAAAACTATT 
GTAGATATAT TAAATTTTAA GTATTTGTTT GTGTAAAAAA AAAA

Gene models with high sequence identity

  1. AT2G25625.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT2G25625.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; Has 24 Blast hits to 24 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL09-96-C10 introduced

  • F01509 - Specific phenotypes were NOT observed.
  • F10303 - Specific phenotypes were NOT observed.
  • F17551 - rosette leaf::dark green / rosette leaf::increased width / rosette leaf::abnormal / cauline leaf::decreased size / whole plant::decreased height / stem::abnormal / rosette leaf::epinastic / rosette leaf::abnormal / cauline leaf::abnormal
  • F18120 - Specific phenotypes were NOT observed.
  • F21348 - Specific phenotypes were NOT observed.
  • F29546 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

6 mutant lines found