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RAFL14-16-I02

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda18276)

full reading [+] show sequence

Nucleotide sequence: RAFL14-16-I02 - full reading 
ATTCACTGAT TATCGTTTAA GGCAAATTAA GATCATCTTC ATAAATCTTC 
TCAGATCTCT TCCAATTTTC TAGAAAAAAC ATGTCTTGCT GTGGTGGAAG 
CTGTGGTTGT GGATCTGCCT GCAAGTGCGG CAATGGTTGC GGAGGTTGCA 
AAAGGTACCC TGACTTGGAG AACACCGCCA CCGAGACTCT TGTCCTCGGT 
GTTGCTCCGG CGATGAACTC TCAGTACGAG GCTTCCGGCG AGACTTTCGT 
TGCCGAGAAT GATGCTTGCA AATGCGGATC TGACTGCAAG TGCAACCCTT 
GTACCTGCAA ATGAAGAACT TCATAAACCC TAAGTCTGTA ATAACCCTAA 
TGTTATGTTA GGTTTGCTTA TATGTAATAA TTGGCTGATT TTTCCGGTAG 
TTTTGCCGGC GACGTTGGTC TTTCTCTTCT TCTGTGTGTG TTTTTATGGT 
TTGGTCATTA AGATATCTCT GCAAAGTTTT ATCTTTGTGA CTTTATTAAT 
CCTAAGACTA TTATGGGTTT GTATTAAAGT TTGCTTCTTT CTTGCTCACT 
ACACAATTAA GATTCAAGCC CATTGTCTCT CTGGTTATAA AGCAAAAAAA 
AAA

Gene models with high sequence identity

  1. AT5G02380.1 [+] show detail - metallothionein 2B
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT5G02380.1

Model type
Protein coding
Short Description
metallothionein 2B
Curator Summary
cysteine-rich protein with copper-binding activity
Computational Description
metallothionein 2B (MT2B); CONTAINS InterPro DOMAIN/s: Plant metallothionein, family 15 (InterPro:IPR000347); BEST Arabidopsis thaliana protein match is: metallothionein 2A (TAIR:AT3G09390.1); Has 601 Blast hits to 601 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 21; Fungi - 0; Plants - 576; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL14-16-I02 introduced

  • F02622 - Specific phenotypes were NOT observed.
  • F11046 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

7 mutant lines found