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RAFL14-57-K16

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda18802)

full reading [+] show sequence

Nucleotide sequence: RAFL14-57-K16 - full reading 
GTCCGGTGTC GCCGTCCTCC ATCGGTTGGT TCCTCTACCA ACGGTGGTTG 
GCTCTTGTCT AGCTTCTCCG TCGTCCGTCT CCGGCGGTTT AGGCTAGCTT 
TTGGCCGGAT TTCTTTTTTC GTTTTGTTTT ATGTTCTCGT TTTCTATAGA 
TCCAGTTTGA TTTTGCTCCT TTGTGTTCTA ACTCTTAGAG GGCTCAATTC 
CTTGAACCTC CTTTGTTTAA AGGGCTCAAT TTGTTTTTCA AGCTTATCGA 
TTTCAATTAT ATAAGAACAA ATTAGAGTTG TGGATTGGGG TTTTCTCTAA 
TGCCTTTGAG TTGGGTTTTA TGCAATTGAG TCAATTGTCA TATTGGTTTT 
TGGAAACGAG TGTTTTTATT TTACTTTTAG GTGTTCATGG AAGTTTCATT 
GGCTTAAGTT CTACGCTGAT GTCGTTTGAA GATGATGATA TGACTACCCA 
GGGGAGATTT TCCTTTGCGA ATTCGAAGAT GAAGAAGATT GATGGGATTC 
TCTGAATTTT GTGTTGCTCC ATCGGACAAG CTTGAAGTCT TGGTGGTTCC 
TGGTGGTTTT GGAGTTCCCT GCAATGACTA ACCAAATCGG CGGTGGACTA 
CATCAATTAC TTCCTAAAAG GGTTTCTTGC TTCAACTGGG CTTTAATTTA 
GTTGGACTTT TATCTTTATT TTGTTTTTGT CTGGAGACTG AAAGCGGAGG 
TTTCCACTCT TTTGTAATCT TTACAATCTT TGGTTTAAAT AAGAGACAAC 
ACTTATGAGC AAAAAAAAAA

Gene models with high sequence identity

  1. AT5G13560.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37370.1); ...
    E-value: 0; Score: 99.74

 

InterPro Scan Digest

See the detailed result >

AT5G13560.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37370.1); Has 12055 Blast hits to 8846 proteins in 811 species: Archae - 217; Bacteria - 1046; Metazoa - 6104; Fungi - 1115; Plants - 528; Viruses - 14; Other Eukaryotes - 3031 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL14-57-K16 introduced

  • F02924 - seed::decreased width
  • F03805 - Specific phenotypes were NOT observed.
  • F04132 - Specific phenotypes were NOT observed.
  • F04544 - Specific phenotypes were NOT observed.
  • F04636 - Specific phenotypes were NOT observed.
  • F11041 - rosette leaf::decreased size / rosette leaf::present in greater numbers in organism / cauline leaf::decreased size / cauline leaf::abnormal / sporophyte vegetative stage::decreased speed / whole plant flowering stage::late / fruit::decreased length
  • F27243 - Specific phenotypes were NOT observed.
  • F29712 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

10 mutant lines found