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  3. RAFL19-86-O07

RAFL19-86-O07

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda11641)

full reading [+] show sequence

Nucleotide sequence: RAFL19-86-O07 - full reading 
AATTCGTCGA GAACCGAGTG ACCGTTTCTA GTGCTCACAG AGAGAGAGAG 
AGAGAGAGAG AGAGAGAGGC GCTGTGGATT TGTGGGAGAG TAGGGACATC 
AGAGGATTCT TCGATCTTCA GATTCTTACT CGACGAATCC TTAATCGCTC 
ACCTGCAGTT GTTCTTATCC TCCGCTTATT CCGTCGAGTG CCGTGGCGGC 
CAATTTCGGC AACTCTGCGC CACTGATGAT TTTGATGGTT AGATCTTTTA 
ATTGATTCTA AAGAGTGAGA TGTTAAAGCA GACTATAAGA TGGATTTGAT 
ACTTCATCCA GTAGTAGCTT AAGAAATATT GCGGTTATGT CAGAGTCTCG 
TCAAAGGCCT CCTTTTAAGG GCCCGAGATG GATTATCACT TTGGTTGTTC 
TGGTTACGGT TGTTGTCATT ACCGCATTCA TATATCCTCC GCGGAATTCT 
GTGGCTTGCT ATATGTTTTC TGGTCCTGGA TGTCCTTTAT ACCAGCAGTT 
TTTGTTTGTA CCTACTCGGG AATTGACTGA CTCTGAAGCT GCTGCTCAAG 
TTGTCATGAA TGAAATCATG AACCTACCTC AATCTAAGAC AGCAAATCCC 
AAGTTAGCTT TCATGTTCTT AACTCCAGGG ACGCTGCCTT TTGAGCCTCT 
CTGGGAAATG TTTTTCCGTG GTCATGAGAA CAAATTTTCA GTTTATGTGC 
ATGCCTCAAA GAAAAGTCCT GTACATACAA GCAGCTATTT TGTTGGTCGA 
GATATTCACA GTCACAAGGT TGCTTGGGGT CAGATATCAA TGGTTGATGC 
AGAAAGAAGG CTATTAGCTC ATGCTCTCGT TGATCCTGAT AATCAACACT 
TTATATTGCT GTCAGATAGT TGTGTACCGC TATTCGACTT TAACTATATC 
TATAACCACT TGATCTTCGC GAATCTCAGC TTCATTGATT GTTTTGAGGA 
TCCTGGACCA CATGGATCTG GTAGGTATTC ACAACATATG CTGCCTGAGG 
TTGAAAAGAA GGATTTTCGG AAGGGCTCAC AGTGGTTTTC AATGAAGAGG 
AGACATGCTA TAGTCGTCAT GGCGGACAGC CTTTACTACA CAAAATTCAA 
GCTTTACTGT AGGCCAAATA TGGAAGGACG CAACTGCTAT GCGGACGAGC 
ATTATTTTCC AACTCTTTTC AATATGATTG ATCCAGATGG AATAGCAAAC 
TGGTCGGTCA CACATGTAGA TTGGTCCGAG GGCAAATGGC ATCCGAAGCT 
GTACAATGCA AGAGACATCA CTCCTTACCT CATCAGGAAA ATCAAGTCCA 
TCCAACTTGC TTACCATGTC ACAAGCGATT TAAAGAAAGT GACGACAGTA 
AAGCCGTGTC TATGGAAAGG AGAGCAACGT CCATGTTACC TATTTGCTCG 
GAAGTTTAAT CCTGAAACTC TAGACCGATT GATGTATCTC TTCCCTAACT 
ACACCTCGCT GGTTTGAAAG GCTTATCGGA TTCTCGATTG TCCGGTTTGT 
TCTTTGTTAA GCTCTTACCA AAGCATACAC CTTGTGTGAT AATTATTAGG 
ACCATTCATA TTGCTGTGAT TCAAAGTTGG GTTTGAGCCT GGCACAGACA 
AGAACAAGAA CTGCTCTGGT GTTTTTTTGG TTTATGGTTA ACAAAACATT 
AGCGTGCT

Gene models with high sequence identity

  1. AT4G31350.1 [+] show detail - Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT4G31350.1

Model type
Protein coding
Short Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
Computational Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT2G19160.1); Has 585 Blast hits to 585 proteins in 21 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 553; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL19-86-O07 introduced

  • F02327 - Specific phenotypes were NOT observed.
  • F24738 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

7 mutant lines found