1. Home
  2. Full-length cDNAs
  3. RAFL21-10-E14

RAFL21-10-E14

RIKEN Arabidopsis Full-length cDNAs

Resource: (pda11787)

full reading [+] show sequence

Nucleotide sequence: RAFL21-10-E14 - full reading
AACCATGGCT TCTCGTGCTC TTTCATCGCC GTTCAACGCT TCGCTCTAAG 
CCGCAAGACA AGGAAGCAGT TACAGGTGGT GGCTATGGCT CCTGAGGAAG
AGAAGCTCAC TCGTCGCAAT CCTCTCGATT TCCCTATCGA ATGGGAGAGA
CCAAAGCCAG GGAGGAGACC AGATATATTC CCAAAGTTTA GTCCTATGAA
GTCACCGTTG CCTCCTCCTA TGCCTTATGA TCCTCCAGAA GAAGAGGAAG
AAGAGGAAGA GAAGAAAGAA GAAGAAACTG AAGATGACCC TGAAAAGGAA
GACGAGGACC AACCCGATAA CCGGTCGTAA GAGGTTTCAT TTTTTCTAAC
TGTTATTGTT GTTGTTTTTT TGCCTTAGAG ACATGTTTAG ATCTTCTTTC
ATTTCAAAGA TAAAATAGAA GTATTGTCAA CCCCACCGAA AGCGCTTTAG
TGGAAGCTCT GAACTCATAT TACT

Gene models with high sequence identity

  1. AT3G24506.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
    E-value: 0; Score: 100.00

 

InterPro Scan Digest

See the detailed result >

AT3G24506.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17240.1); Has 4864 Blast hits to 709 proteins in 125 species: Archae - 0; Bacteria - 592; Metazoa - 786; Fungi - 33; Plants - 410; Viruses - 61; Other Eukaryotes - 2982 (source: NCBI BLink).
Link
InterPro Scan - TAIR

Mutant lines with RAFL21-10-E14 introduced

  • F00815 - Specific phenotypes were NOT observed.
  • F07637 - Specific phenotypes were NOT observed.
  • F14350 - Specific phenotypes were NOT observed.
  • F15425 - Specific phenotypes were NOT observed.
  • F16204 - Specific phenotypes were NOT observed.
  • F20846 - Specific phenotypes were NOT observed.
  • F27914 - seed::increased size
  • F29840 - Specific phenotypes were NOT observed.

Mutant lines with disrupted or induced

9 mutant lines found