InterPro Scan Result: AT1G04510.1

SEQUENCE: AT1G04510.1 CRC64: 10593B786D080786 LENGTH: 523 aa
InterPro
IPR001680
Repeat
WD40 repeat
SM00320[208-250]T 3.3 SM00320 no description[253-292]T 1.9e-08 SM00320 no description[298-337]T 7.8e-06 SM00320 no description[340-382]T 1.7 SM00320 no description[385-423]T 1e-07 SM00320 no description[426-461]T 83 SM00320 no description[468-509]T 0.14 SM00320 no descriptionno description
InterPro
IPR003613
Domain
U box domain
SM00504[1-66]T 7.8e-21 SM00504 no descriptionno description
InterPro
IPR011046
Domain
WD40 repeat-like-containing domain
SSF50978[222-509]T 1.8e-58 SSF50978 WD40 repeat-likeWD40 repeat-like
InterPro
IPR013083
Domain
Zinc finger, RING/FYVE/PHD-type
G3DSA:3.30.40.10[1-56]T 4.6e-19 G3DSA:3.30.40.10 no descriptionno description
InterPro
IPR013915
Domain
Pre-mRNA-splicing factor 19
PF08606[66-132]T 5.5e-31 PF08606 Prp19Prp19
InterPro
IPR015943
Domain
WD40/YVTN repeat-like-containing domain
G3DSA:2.130.10.10[211-508]T 1.3e-60 G3DSA:2.130.10.10 no descriptionno description
InterPro
IPR017986
Domain
WD40-repeat-containing domain
PS50294[218-432]T 34.539 PS50294 WD_REPEATS_REGIONWD_REPEATS_REGION
InterPro
IPR019781
Repeat
WD40 repeat, subgroup
PF00400[255-291]T 5.2e-10 PF00400 WD40[302-337]T 9.6e-05 PF00400 WD40[358-382]T 0.098 PF00400 WD40[389-423]T 5e-07 PF00400 WD40[481-508]T 0.027 PF00400 WD40WD40
InterPro
IPR019782
Repeat
WD40 repeat 2
PS50082[260-291]T 14.585 PS50082 WD_REPEATS_2[305-346]T 9.071 PS50082 WD_REPEATS_2[350-391]T 9.940 PS50082 WD_REPEATS_2[392-432]T 10.408 PS50082 WD_REPEATS_2WD_REPEATS_2
noIPR
unintegrated
unintegrated
coil[115-136]? NA coil coiled-coilcoiled-coil
PTHR13889[1-522]T 0 PTHR13889 FAMILY NOT NAMEDFAMILY NOT NAMED
PTHR13889:SF9[1-522]T 0 PTHR13889:SF9 PRE-MRNA SPLICING FACTOR PRP19PRE-MRNA SPLICING FACTOR PRP19
SSF57850[1-55]T 9.5e-15 SSF57850 RING/U-boxRING/U-box
SEQUENCE: AT1G04510.1 CRC64: 10593B786D080786 LENGTH: 523 aa
InterPro
IPR001680
Repeat
WD40 repeat
SMARTSM00320no description
 3.3 [208-250]T  1.9e-08 [253-292]T  7.8e-06 [298-337]T  1.7 [340-382]T 
 1e-07 [385-423]T  83 [426-461]T  0.14 [468-509]T  
Parentno parent
ChildrenIPR019781
Found inIPR000009IPR000664IPR001632IPR004083IPR009146IPR011046IPR013577IPR013905IPR015505IPR015943IPR016346IPR016391IPR016453IPR016902IPR017149IPR017233IPR017251IPR017252IPR017383IPR017399IPR017422IPR017986
ContainsIPR019775
GO termsMolecular Function: protein binding (GO:0005515)
InterPro
IPR003613
Domain
U box domain
SMARTSM00504no description
 7.8e-21 [1-66]T    
ParentIPR013083
Childrenno children
Found inno entries
Containsno entries
GO termsCellular Component: ubiquitin ligase complex (GO:0000151)
Molecular Function: ubiquitin-protein ligase activity (GO:0004842)
Biological Process: protein ubiquitination (GO:0016567)
InterPro
IPR011046
Domain
WD40 repeat-like-containing domain
SUPERFAMILYSSF50978WD40 repeat-like
 1.8e-58 [222-509]T    
ParentIPR015943
ChildrenIPR017986
Found inIPR000009IPR000664IPR004083IPR009146IPR011387IPR013863IPR015048IPR015049IPR015505IPR016346IPR016391IPR016453IPR016528IPR016616IPR016902IPR017149IPR017169IPR017217IPR017233IPR017251IPR017252IPR017383IPR017399IPR017422
ContainsIPR001632IPR001680IPR013577IPR018067IPR019417IPR019775IPR019781IPR019782IPR020389
GO termsMolecular Function: protein binding (GO:0005515)
InterPro
IPR013083
Domain
Zinc finger, RING/FYVE/PHD-type
GENE3DG3DSA:3.30.40.10no description
 4.6e-19 [1-56]T    
Parentno parent
ChildrenIPR003613IPR011011IPR018957IPR022723
Found inIPR001237IPR002853IPR004575IPR004580IPR012227IPR016390IPR016398IPR016818IPR017335
ContainsIPR001965IPR003315IPR017455IPR017907IPR019786
GO termsnone
InterPro
IPR013915
Domain
Pre-mRNA-splicing factor 19
PFAMPF08606Prp19
 5.5e-31 [66-132]T    
Parentno parent
Childrenno children
Found inno entries
Containsno entries
GO termsnone
InterPro
IPR015943
Domain
WD40/YVTN repeat-like-containing domain
GENE3DG3DSA:2.130.10.10no description
 1.3e-60 [211-508]T    
Parentno parent
ChildrenIPR001627IPR011045IPR011046
Found inIPR004083IPR008311IPR008826IPR011400IPR012393IPR013476IPR016346IPR016391IPR016453IPR017169IPR017217IPR017233IPR017251IPR017252IPR017383IPR017399IPR017422
ContainsIPR001632IPR001680IPR011044IPR011964IPR013577IPR013979IPR018067IPR019417IPR019775IPR019781IPR019782IPR020389
GO termsMolecular Function: protein binding (GO:0005515)
InterPro
IPR017986
Domain
WD40-repeat-containing domain
PROFILEPS50294WD_REPEATS_REGION
 34.539 [218-432]T    
ParentIPR011046
Childrenno children
Found inIPR004083IPR009146IPR015505IPR016346IPR016391IPR016453IPR017149IPR017233IPR017251IPR017252IPR017383IPR017399IPR017422
ContainsIPR001632IPR001680IPR019775IPR019781IPR019782
GO termsMolecular Function: protein binding (GO:0005515)
InterPro
IPR019781
Repeat
WD40 repeat, subgroup
PFAMPF00400WD40
 5.2e-10 [255-291]T  9.6e-05 [302-337]T  0.098 [358-382]T  5e-07 [389-423]T 
 0.027 [481-508]T    
ParentIPR001680
ChildrenIPR019782
Found inIPR000009IPR000664IPR001632IPR004083IPR009146IPR011046IPR015505IPR015943IPR016346IPR016391IPR016453IPR016902IPR017149IPR017233IPR017251IPR017252IPR017383IPR017399IPR017422IPR017986
ContainsIPR019775
GO termsnone
InterPro
IPR019782
Repeat
WD40 repeat 2
PROFILEPS50082WD_REPEATS_2
 14.585 [260-291]T  9.071 [305-346]T  9.940 [350-391]T  10.408 [392-432]T 
ParentIPR019781
Childrenno children
Found inIPR000664IPR001632IPR009146IPR011046IPR015505IPR015943IPR016346IPR016391IPR016453IPR017149IPR017233IPR017251IPR017252IPR017383IPR017399IPR017422IPR017986
ContainsIPR019775
GO termsnone
noIPR
unintegrated
unintegrated
COILcoilcoiled-coil
 NA [115-136]?    
PANTHERPTHR13889FAMILY NOT NAMED
 0 [1-522]T    
PANTHERPTHR13889:SF9PRE-MRNA SPLICING FACTOR PRP19
 0 [1-522]T    
SUPERFAMILYSSF57850RING/U-box
 9.5e-15 [1-55]T    
Parentno parent
Childrenno children
Found inno entries
Containsno entries
GO termsnone