InterPro Scan Result: AT1G16970.1

SEQUENCE: AT1G16970.1 CRC64: AF1173E3DE189396 LENGTH: 621 aa
InterPro
IPR003034
Domain
DNA-binding SAP
PF02037[585-619]T 6.099999999999999E-6 PF02037 SAPSAP
SM00513[585-619]T 0.005200000890033361 SM00513 SAPSAP
PS50800[585-619]T 0.0 PS50800 SAPSAP
InterPro
IPR005160
Domain
Ku70/Ku80 C-terminal arm
G3DSA:1.10.1600.10[447-547]T 1.1E-28 G3DSA:1.10.1600.10 Ku_CKu_C
PF03730[484-575]T 2.800000000000005E-23 PF03730 Ku_CKu_C
InterPro
IPR005161
Domain
Ku70/Ku80, N-terminal alpha/beta
PF03731[30-266]T 5.4000000000000185E-61 PF03731 Ku_NKu_N
InterPro
IPR006164
Domain
DNA helicase, ATP-dependent, Ku type
PF02735[273-471]T 4.900000000000004E-41 PF02735 KuKu
SM00559[318-461]T 2.999987504457064E-51 SM00559 Ku78Ku78
InterPro
IPR006165
Family
DNA helicase, ATP-dependent, Ku70 subunit
PIRSF003033[1-621]T 2.0000139277205003E-73 PIRSF003033 Ku70Ku70
TIGR00578[17-620]T 8.299941133692758E-80 TIGR00578 ku70ku70
InterPro
IPR016194
Domain
Spen Paralogue and Orthologue SPOC, C-terminal-like
G3DSA:2.40.290.10[322-446]T 3.4000000000000385E-42 G3DSA:2.40.290.10 G3DSA:2.40.290.10G3DSA:2.40.290.10
SSF100939[265-549]T 8.600063302139295E-74 SSF100939 SPOC-likeSPOC-like
noIPR
unintegrated
unintegrated
G3DSA:1.10.720.30[584-619]T 8.900000000000004E-9 G3DSA:1.10.720.30 G3DSA:1.10.720.30G3DSA:1.10.720.30
G3DSA:3.40.50.410[28-260]T 2.800000000000005E-64 G3DSA:3.40.50.410 G3DSA:3.40.50.410G3DSA:3.40.50.410
PTHR12604[1-621]T 0.0 PTHR12604 PTHR12604PTHR12604
PTHR12604:SF2[1-621]T 0.0 PTHR12604:SF2 PTHR12604:SF2PTHR12604:SF2
SSF53300[27-264]T 1.3000049540733013E-47 SSF53300 SSF53300SSF53300
SSF68906[571-621]T 1.4000004576398236E-7 SSF68906 SSF68906SSF68906
SEQUENCE: AT1G16970.1 CRC64: AF1173E3DE189396 LENGTH: 621 aa
InterPro
IPR003034
Domain
DNA-binding SAP
PFAMPF02037SAP
 6.099999999999999E-6 [585-619]T    
SMARTSM00513SAP
 0.005200000890033361 [585-619]T    
PROFILEPS50800SAP
 0.0 [585-619]T    
Parentno parent
Childrenno children
Found inIPR004580IPR006165
Containsno entries
GO termsMolecular Function: nucleic acid binding (GO:0003676)
InterPro
IPR005160
Domain
Ku70/Ku80 C-terminal arm
GENE3DG3DSA:1.10.1600.10Ku_C
 1.1E-28 [447-547]T    
PFAMPF03730Ku_C
 2.800000000000005E-23 [484-575]T    
Parentno parent
Childrenno children
Found inIPR006165IPR016194
Containsno entries
GO termsMolecular Function: DNA binding (GO:0003677)
Molecular Function: ATP-dependent DNA helicase activity (GO:0004003)
Biological Process: double-strand break repair via nonhomologous end joining (GO:0006303)
InterPro
IPR005161
Domain
Ku70/Ku80, N-terminal alpha/beta
PFAMPF03731Ku_N
 5.4000000000000185E-61 [30-266]T    
Parentno parent
Childrenno children
Found inIPR006165
Containsno entries
GO termsnone
InterPro
IPR006164
Domain
DNA helicase, ATP-dependent, Ku type
PFAMPF02735Ku
 4.900000000000004E-41 [273-471]T    
SMARTSM00559Ku78
 2.999987504457064E-51 [318-461]T    
Parentno parent
Childrenno children
Found inIPR006165IPR009187IPR016194
Containsno entries
GO termsMolecular Function: DNA binding (GO:0003677)
Molecular Function: ATP-dependent DNA helicase activity (GO:0004003)
Biological Process: double-strand break repair via nonhomologous end joining (GO:0006303)
InterPro
IPR006165
Family
DNA helicase, ATP-dependent, Ku70 subunit
PIRPIRSF003033Ku70
 2.0000139277205003E-73 [1-621]T    
TIGRFAMsTIGR00578ku70
 8.299941133692758E-80 [17-620]T    
Parentno parent
Childrenno children
Found inno entries
ContainsIPR003034IPR005160IPR005161IPR006164IPR016194
GO termsMolecular Function: DNA binding (GO:0003677)
Molecular Function: ATP-dependent DNA helicase activity (GO:0004003)
Cellular Component: nucleus (GO:0005634)
Cellular Component: DNA-dependent protein kinase-DNA ligase 4 complex (GO:0005958)
Biological Process: double-strand break repair via nonhomologous end joining (GO:0006303)
InterPro
IPR016194
Domain
Spen Paralogue and Orthologue SPOC, C-terminal-like
GENE3DG3DSA:2.40.290.10G3DSA:2.40.290.10
 3.4000000000000385E-42 [322-446]T    
SUPERFAMILYSSF100939SPOC-like
 8.600063302139295E-74 [265-549]T    
Parentno parent
Childrenno children
Found inIPR006165IPR009187
ContainsIPR005160IPR006164IPR010912
GO termsMolecular Function: binding (GO:0005488)
noIPR
unintegrated
unintegrated
GENE3DG3DSA:1.10.720.30G3DSA:1.10.720.30
 8.900000000000004E-9 [584-619]T    
GENE3DG3DSA:3.40.50.410G3DSA:3.40.50.410
 2.800000000000005E-64 [28-260]T    
PANTHERPTHR12604PTHR12604
 0.0 [1-621]T    
PANTHERPTHR12604:SF2PTHR12604:SF2
 0.0 [1-621]T    
SUPERFAMILYSSF53300SSF53300
 1.3000049540733013E-47 [27-264]T    
SUPERFAMILYSSF68906SSF68906
 1.4000004576398236E-7 [571-621]T    
Parentno parent
Childrenno children
Found inno entries
Containsno entries
GO termsnone