InterPro Scan Result: AT2G38560.1

SEQUENCE: AT2G38560.1 CRC64: 9A176DC31FA8E885 LENGTH: 378 aa
InterPro
IPR001222
Domain
Zinc finger, TFIIS-type
PF01096[338-376]T 3.300000000000004E-15 PF01096 TFIIS_CTFIIS_C
SM00440[338-377]T 8.499992917463232E-23 SM00440 ZnF_C2C2ZnF_C2C2
PS00466[340-375]T 0.0 PS00466 ZF_TFIIS_1ZF_TFIIS_1
PS51133[336-376]T 0.0 PS51133 ZF_TFIIS_2ZF_TFIIS_2
InterPro
IPR003617
Domain
Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type
SM00509[8-88]T 1.0E-28 SM00509 TFS2NTFS2N
InterPro
IPR003618
Domain
Transcription elongation factor S-II, central domain
G3DSA:1.10.472.30[192-309]T 4.1000000000000424E-33 G3DSA:1.10.472.30 TFIIS_centreTFIIS_centre
PF07500[206-326]T 1.3000000000000007E-32 PF07500 TFIIS_MTFIIS_M
PS51321[210-333]T 0.0 PS51321 TFIIS_CENTRALTFIIS_CENTRAL
SSF46942[189-309]T 1.3999989204987804E-27 SSF46942 TFIIS_centreTFIIS_centre
InterPro
IPR006289
Family
Transcription elongation factor, TFIIS
TIGR01385[11-378]T 0.0 TIGR01385 TFSIITFSII
InterPro
IPR016492
Family
Transcription elongation factor, IIS
PIRSF006704[2-378]T 0.0 PIRSF006704 TF_IISTF_IIS
InterPro
IPR017890
Domain
Transcription elongation factor S-IIM
SM00510[208-316]T 7.699984805336902E-44 SM00510 TFS2MTFS2M
InterPro
IPR017923
Domain
Transcription factor IIS, N-terminal
G3DSA:1.20.930.10[25-98]T 2.800000000000005E-15 G3DSA:1.20.930.10 TFIIS_N_fun-typTFIIS_N_fun-typ
PF08711[37-86]T 2.700000000000004E-10 PF08711 TFIISTFIIS
PS51319[10-89]T 0.0 PS51319 TFIIS_NTFIIS_N
SSF47676[27-103]T 7.000007341299033E-16 SSF47676 TFIIS_conservedTFIIS_conserved
noIPR
unintegrated
unintegrated
G3DSA:2.20.25.10[311-378]T 4.400000000000006E-21 G3DSA:2.20.25.10 G3DSA:2.20.25.10G3DSA:2.20.25.10
PTHR11477[33-378]T 5.100032422021555E-118 PTHR11477 PTHR11477PTHR11477
SSF57783[315-376]T 3.600004339659267E-18 SSF57783 SSF57783SSF57783
SEQUENCE: AT2G38560.1 CRC64: 9A176DC31FA8E885 LENGTH: 378 aa
InterPro
IPR001222
Domain
Zinc finger, TFIIS-type
PFAMPF01096TFIIS_C
 3.300000000000004E-15 [338-376]T    
SMARTSM00440ZnF_C2C2
 8.499992917463232E-23 [338-377]T    
PROSITEPS00466ZF_TFIIS_1
 0.0 [340-375]T    
PROFILEPS51133ZF_TFIIS_2
 0.0 [336-376]T    
Parentno parent
Childrenno children
Found inIPR006288IPR006289IPR009162IPR016492
Containsno entries
GO termsMolecular Function: nucleic acid binding (GO:0003676)
Molecular Function: zinc ion binding (GO:0008270)
Molecular Function: transcription regulator activity (GO:0030528)
Biological Process: regulation of transcription (GO:0045449)
InterPro
IPR003617
Domain
Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type
SMARTSM00509TFS2N
 1.0E-28 [8-88]T    
ParentIPR017923
Childrenno children
Found inIPR006289IPR016492
Containsno entries
GO termsCellular Component: nucleus (GO:0005634)
Biological Process: transcription (GO:0006350)
InterPro
IPR003618
Domain
Transcription elongation factor S-II, central domain
GENE3DG3DSA:1.10.472.30TFIIS_centre
 4.1000000000000424E-33 [192-309]T    
PFAMPF07500TFIIS_M
 1.3000000000000007E-32 [206-326]T    
PROFILEPS51321TFIIS_CENTRAL
 0.0 [210-333]T    
SUPERFAMILYSSF46942TFIIS_centre
 1.3999989204987804E-27 [189-309]T    
Parentno parent
ChildrenIPR017890
Found inno entries
Containsno entries
GO termsBiological Process: transcription (GO:0006350)
InterPro
IPR006289
Family
Transcription elongation factor, TFIIS
TIGRFAMsTIGR01385TFSII
 0.0 [11-378]T    
ParentIPR016492
Childrenno children
Found inno entries
ContainsIPR001222IPR003617IPR017890
GO termsMolecular Function: nucleic acid binding (GO:0003676)
Molecular Function: RNA polymerase II transcription factor activity (GO:0003702)
Molecular Function: translation elongation factor activity (GO:0003746)
Cellular Component: nucleus (GO:0005634)
InterPro
IPR016492
Family
Transcription elongation factor, IIS
PIRPIRSF006704TF_IIS
 0.0 [2-378]T    
Parentno parent
ChildrenIPR006289
Found inno entries
ContainsIPR001222IPR003617IPR017890
GO termsMolecular Function: transcription elongation regulator activity (GO:0003711)
Biological Process: regulation of transcription from RNA polymerase II promoter (GO:0006357)
InterPro
IPR017890
Domain
Transcription elongation factor S-IIM
SMARTSM00510TFS2M
 7.699984805336902E-44 [208-316]T    
ParentIPR003618
Childrenno children
Found inIPR006289IPR016492
Containsno entries
GO termsCellular Component: nucleus (GO:0005634)
Biological Process: transcription (GO:0006350)
Molecular Function: zinc ion binding (GO:0008270)
InterPro
IPR017923
Domain
Transcription factor IIS, N-terminal
GENE3DG3DSA:1.20.930.10TFIIS_N_fun-typ
 2.800000000000005E-15 [25-98]T    
PFAMPF08711TFIIS
 2.700000000000004E-10 [37-86]T    
PROFILEPS51319TFIIS_N
 0.0 [10-89]T    
SUPERFAMILYSSF47676TFIIS_conserved
 7.000007341299033E-16 [27-103]T    
Parentno parent
ChildrenIPR003617
Found inno entries
Containsno entries
GO termsMolecular Function: DNA binding (GO:0003677)
Cellular Component: nucleus (GO:0005634)
Biological Process: transcription (GO:0006350)
Molecular Function: transcription regulator activity (GO:0030528)
noIPR
unintegrated
unintegrated
GENE3DG3DSA:2.20.25.10G3DSA:2.20.25.10
 4.400000000000006E-21 [311-378]T    
PANTHERPTHR11477PTHR11477
 5.100032422021555E-118 [33-378]T    
SUPERFAMILYSSF57783SSF57783
 3.600004339659267E-18 [315-376]T    
Parentno parent
Childrenno children
Found inno entries
Containsno entries
GO termsnone