InterPro Scan Result: AT4G05420.1

SEQUENCE: AT4G05420.1 CRC64: 79071E5BC62A197E LENGTH: 1088 aa
InterPro
IPR004871
Domain
Cleavage/polyadenylation specificity factor, A subunit, C-terminal
PF03178[744-1057]T 2.5e-83 PF03178 CPSF_ACPSF_A
InterPro
IPR011046
Domain
WD40 repeat-like-containing domain
SSF50978[465-888]T 4.3e-08 SSF50978 WD40 repeat-likeWD40 repeat-like
InterPro
IPR015943
Domain
WD40/YVTN repeat-like-containing domain
G3DSA:2.130.10.10[832-891]T 1.5e-06 G3DSA:2.130.10.10 no descriptionno description
noIPR
unintegrated
unintegrated
coil[422-443]? NA coil coiled-coilcoiled-coil
PTHR10644[3-1088]T 0 PTHR10644 DNA REPAIR/RNA PROCESSING CPSF FAMILYDNA REPAIR/RNA PROCESSING CPSF FAMILY
PTHR10644:SF3[3-1088]T 0 PTHR10644:SF3 DNA DAMAGE-BINDING PROTEIN 1 (DAMAGE-SPECIFIC DNA-BINDING PROTEIN 1)(UV-DAMAGED DNA-BINDING FACTOR)DNA DAMAGE-BINDING PROTEIN 1 (DAMAGE-SPECIFIC DNA-BINDING PROTEIN 1)(UV-DAMAGED DNA-BINDING FACTOR)
seg[433-442]? NA seg segseg
SEQUENCE: AT4G05420.1 CRC64: 79071E5BC62A197E LENGTH: 1088 aa
InterPro
IPR004871
Domain
Cleavage/polyadenylation specificity factor, A subunit, C-terminal
PFAMPF03178CPSF_A
 2.5e-83 [744-1057]T    
Parentno parent
Childrenno children
Found inno entries
Containsno entries
GO termsMolecular Function: nucleic acid binding (GO:0003676)
Cellular Component: nucleus (GO:0005634)
InterPro
IPR011046
Domain
WD40 repeat-like-containing domain
SUPERFAMILYSSF50978WD40 repeat-like
 4.3e-08 [465-888]T    
ParentIPR015943
ChildrenIPR017986
Found inIPR000009IPR000664IPR004083IPR009146IPR011387IPR013863IPR015048IPR015049IPR015505IPR016346IPR016391IPR016453IPR016528IPR016616IPR016902IPR017149IPR017169IPR017217IPR017233IPR017251IPR017252IPR017383IPR017399IPR017422
ContainsIPR001632IPR001680IPR013577IPR018067IPR019417IPR019775IPR019781IPR019782IPR020389
GO termsMolecular Function: protein binding (GO:0005515)
InterPro
IPR015943
Domain
WD40/YVTN repeat-like-containing domain
GENE3DG3DSA:2.130.10.10no description
 1.5e-06 [832-891]T    
Parentno parent
ChildrenIPR001627IPR011045IPR011046
Found inIPR004083IPR008311IPR008826IPR011400IPR012393IPR013476IPR016346IPR016391IPR016453IPR017169IPR017217IPR017233IPR017251IPR017252IPR017383IPR017399IPR017422
ContainsIPR001632IPR001680IPR011044IPR011964IPR013577IPR013979IPR018067IPR019417IPR019775IPR019781IPR019782IPR020389
GO termsMolecular Function: protein binding (GO:0005515)
noIPR
unintegrated
unintegrated
COILcoilcoiled-coil
 NA [422-443]?    
PANTHERPTHR10644DNA REPAIR/RNA PROCESSING CPSF FAMILY
 0 [3-1088]T    
PANTHERPTHR10644:SF3DNA DAMAGE-BINDING PROTEIN 1 (DAMAGE-SPECIFIC DNA-BINDING PROTEIN 1)(UV-DAMAGED DNA-BINDING FACTOR)
 0 [3-1088]T    
SEGsegseg
 NA [433-442]?    
Parentno parent
Childrenno children
Found inno entries
Containsno entries
GO termsnone