InterPro Scan Result: AT4G16250.1

SEQUENCE: AT4G16250.1 CRC64: BB7CFE19C50ACBAB LENGTH: 1164 aa
InterPro
IPR000014
Domain
PAS
SM00091[658-725]T 5.59999989417023E-9 SM00091 PAS[789-859]T 0.010999999970229565 SM00091 PASPAS
TIGR00229[654-784]T 5.099998824399772E-6 TIGR00229 sensory_boxsensory_box
PS50112[656-727]T 0.0 PS50112 PAS[790-842]T 0.0 PS50112 PASPAS
InterPro
IPR001294
Family
Phytochrome
PR01033[170-192]T 3.8999986179521834E-103 PR01033 PHYTOCHROME[270-289]T 3.8999986179521834E-103 PR01033 PHYTOCHROME[355-376]T 3.8999986179521834E-103 PR01033 PHYTOCHROME[467-487]T 3.8999986179521834E-103 PR01033 PHYTOCHROME[552-571]T 3.8999986179521834E-103 PR01033 PHYTOCHROME[585-603]T 3.8999986179521834E-103 PR01033 PHYTOCHROME[659-675]T 3.8999986179521834E-103 PR01033 PHYTOCHROME[678-693]T 3.8999986179521834E-103 PR01033 PHYTOCHROME[752-769]T 3.8999986179521834E-103 PR01033 PHYTOCHROME[772-792]T 3.8999986179521834E-103 PR01033 PHYTOCHROMEPHYTOCHROME
InterPro
IPR003018
Domain
GAF
PF01590[256-437]T 7.799999999999993E-37 PF01590 GAFGAF
SM00065[255-447]T 1.9999963603452082E-23 SM00065 GAFGAF
InterPro
IPR003594
Domain
ATPase-like, ATP-binding domain
G3DSA:3.30.565.10[999-1154]T 3.500000000000003E-13 G3DSA:3.30.565.10 ATP_bd_ATPaseATP_bd_ATPase
PF02518[1043-1141]T 8.69999999999999E-9 PF02518 HATPase_cHATPase_c
SM00387[1043-1157]T 1.699999222840494E-14 SM00387 HATPase_cHATPase_c
SSF55874[1001-1154]T 4.799997768362738E-15 SSF55874 ATP_bd_ATPaseATP_bd_ATPase
InterPro
IPR003661
Domain
Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
PF00512[932-995]T 3.0999999999999995E-4 PF00512 HisKAHisKA
SM00388[931-995]T 6.20000124972815E-8 SM00388 HisKAHisKA
InterPro
IPR005467
Domain
Signal transduction histidine kinase, core
PS50109[938-1157]T 0.0 PS50109 HIS_KINHIS_KIN
InterPro
IPR012129
Family
Phytochrome A/B/C/D/E
PIRSF000084[34-1164]T 0.0 PIRSF000084 PhytochromePhytochrome
InterPro
IPR013515
Domain
Phytochrome, central region
PF00360[449-626]T 3.199999999999956E-65 PF00360 PhytochromePhytochrome
InterPro
IPR013516
Binding_site
Phytochrome chromophore binding site
PS00245[355-364]T 0.0 PS00245 PHYTOCHROME_1PHYTOCHROME_1
InterPro
IPR013654
Domain
PAS fold-2
PF08446[105-222]T 1.9999999999999944E-38 PF08446 PAS_2PAS_2
InterPro
IPR013767
Domain
PAS fold
PF00989[659-774]T 2.4E-21 PF00989 PAS[790-909]T 2.3000000000000007E-22 PF00989 PASPAS
InterPro
IPR016132
Domain
Phytochrome chromophore attachment domain
PS50046[255-427]T 0.0 PS50046 PHYTOCHROME_2PHYTOCHROME_2
noIPR
unintegrated
unintegrated
G3DSA:3.30.450.20[661-775]T 1.0999999999999999E-26 G3DSA:3.30.450.20 G3DSA:3.30.450.20[804-909]T 4.100000000000014E-25 G3DSA:3.30.450.20 G3DSA:3.30.450.20G3DSA:3.30.450.20
G3DSA:3.30.450.40[255-379]T 4.500000000000003E-5 G3DSA:3.30.450.40 G3DSA:3.30.450.40G3DSA:3.30.450.40
PTHR24423[658-1134]T 1.3999989204987804E-22 PTHR24423 PTHR24423PTHR24423
SSF55781[255-451]T 2.79999889404114E-9 SSF55781 SSF55781SSF55781
SSF55785[662-772]T 6.000003616381633E-15 SSF55785 SSF55785[773-909]T 8.399998585923064E-13 SSF55785 SSF55785SSF55785
SEQUENCE: AT4G16250.1 CRC64: BB7CFE19C50ACBAB LENGTH: 1164 aa
InterPro
IPR000014
Domain
PAS
SMARTSM00091PAS
 5.59999989417023E-9 [658-725]T  0.010999999970229565 [789-859]T   
TIGRFAMsTIGR00229sensory_box
 5.099998824399772E-6 [654-784]T    
PROFILEPS50112PAS
 0.0 [656-727]T  0.0 [790-842]T   
Parentno parent
ChildrenIPR013655IPR013656IPR013767
Found inIPR001294IPR001321IPR003949IPR003950IPR011785IPR012129IPR012130IPR012226IPR012704IPR014285IPR014310IPR014409IPR015524IPR017181IPR017232
Containsno entries
GO termsMolecular Function: signal transducer activity (GO:0004871)
Biological Process: signal transduction (GO:0007165)
InterPro
IPR001294
Family
Phytochrome
PRINTSPR01033PHYTOCHROME
 3.8999986179521834E-103 [170-192]T  3.8999986179521834E-103 [270-289]T  3.8999986179521834E-103 [355-376]T  3.8999986179521834E-103 [467-487]T 
 3.8999986179521834E-103 [552-571]T  3.8999986179521834E-103 [585-603]T  3.8999986179521834E-103 [659-675]T  3.8999986179521834E-103 [678-693]T 
 3.8999986179521834E-103 [752-769]T  3.8999986179521834E-103 [772-792]T   
Parentno parent
ChildrenIPR009219IPR012129
Found inno entries
ContainsIPR000014IPR003018IPR003594IPR003661IPR013515IPR013516IPR013654IPR013767IPR016132
GO termsMolecular Function: G-protein coupled photoreceptor activity (GO:0008020)
InterPro
IPR003018
Domain
GAF
PFAMPF01590GAF
 7.799999999999993E-37 [256-437]T    
SMARTSM00065GAF
 1.9999963603452082E-23 [255-447]T    
Parentno parent
ChildrenIPR016132
Found inIPR001294IPR010113IPR012074IPR012226IPR014265IPR014525
ContainsIPR000614IPR013516
GO termsMolecular Function: protein binding (GO:0005515)
InterPro
IPR003594
Domain
ATPase-like, ATP-binding domain
GENE3DG3DSA:3.30.565.10ATP_bd_ATPase
 3.500000000000003E-13 [999-1154]T    
PFAMPF02518HATPase_c
 8.69999999999999E-9 [1043-1141]T    
SMARTSM00387HATPase_c
 1.699999222840494E-14 [1043-1157]T    
SUPERFAMILYSSF55874ATP_bd_ATPase
 4.799997768362738E-15 [1001-1154]T    
Parentno parent
ChildrenIPR004358IPR020575
Found inIPR001241IPR001294IPR001404IPR002099IPR005467IPR005734IPR005737IPR005740IPR006290IPR008358IPR010193IPR010194IPR011186IPR011557IPR012129IPR014285IPR014525IPR014763IPR015434IPR015566IPR016380IPR016381IPR016781IPR017171IPR017202IPR017204IPR017205IPR017206IPR020667IPR022510
ContainsIPR014762IPR019805
GO termsMolecular Function: ATP binding (GO:0005524)
InterPro
IPR003661
Domain
Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
PFAMPF00512HisKA
 3.0999999999999995E-4 [932-995]T    
SMARTSM00388HisKA
 6.20000124972815E-8 [931-995]T    
ParentIPR009082
Childrenno children
Found inIPR001294IPR005467IPR006290IPR008358IPR012129IPR014265IPR014302IPR014310IPR014409IPR014525IPR017055IPR017116IPR017181IPR017232IPR022510
Containsno entries
GO termsMolecular Function: two-component sensor activity (GO:0000155)
Biological Process: signal transduction (GO:0007165)
Cellular Component: membrane (GO:0016020)
InterPro
IPR005467
Domain
Signal transduction histidine kinase, core
PROFILEPS50109HIS_KIN
 0.0 [938-1157]T    
Parentno parent
Childrenno children
Found inIPR006290IPR008358IPR012129IPR014265IPR014285IPR014302IPR014310IPR014409IPR014525IPR016380IPR016381IPR017055IPR017116IPR017171IPR017181IPR017202IPR017203IPR017204IPR017205IPR017232IPR022510
ContainsIPR003594IPR003661IPR004358IPR011495IPR011712IPR016120
GO termsMolecular Function: two-component sensor activity (GO:0000155)
Molecular Function: protein histidine kinase activity (GO:0004673)
Biological Process: signal transduction (GO:0007165)
Biological Process: peptidyl-histidine phosphorylation (GO:0018106)
InterPro
IPR012129
Family
Phytochrome A/B/C/D/E
PIRPIRSF000084Phytochrome
 0.0 [34-1164]T    
ParentIPR001294
Childrenno children
Found inno entries
ContainsIPR000014IPR003594IPR003661IPR005467IPR013516IPR013654IPR013767IPR016132
GO termsMolecular Function: photoreceptor activity (GO:0009881)
Biological Process: protein-tetrapyrrole linkage (GO:0017006)
Molecular Function: protein homodimerization activity (GO:0042803)
Biological Process: regulation of transcription (GO:0045449)
InterPro
IPR013515
Domain
Phytochrome, central region
PFAMPF00360Phytochrome
 3.199999999999956E-65 [449-626]T    
Parentno parent
Childrenno children
Found inIPR001294
Containsno entries
GO termsMolecular Function: receptor activity (GO:0004872)
Molecular Function: G-protein coupled photoreceptor activity (GO:0008020)
Biological Process: protein-chromophore linkage (GO:0018298)
InterPro
IPR013516
Binding_site
Phytochrome chromophore binding site
PROSITEPS00245PHYTOCHROME_1
 0.0 [355-364]T    
Parentno parent
Childrenno children
Found inIPR001294IPR003018IPR012129IPR016132
Containsno entries
GO termsMolecular Function: G-protein coupled photoreceptor activity (GO:0008020)
Biological Process: protein-chromophore linkage (GO:0018298)
Biological Process: regulation of transcription (GO:0045449)
InterPro
IPR013654
Domain
PAS fold-2
PFAMPF08446PAS_2
 1.9999999999999944E-38 [105-222]T    
Parentno parent
Childrenno children
Found inIPR001294IPR009219IPR012129
Containsno entries
GO termsMolecular Function: G-protein coupled photoreceptor activity (GO:0008020)
Biological Process: protein-chromophore linkage (GO:0018298)
Biological Process: regulation of transcription (GO:0045449)
InterPro
IPR013767
Domain
PAS fold
PFAMPF00989PAS
 2.4E-21 [659-774]T  2.3000000000000007E-22 [790-909]T   
ParentIPR000014
Childrenno children
Found inIPR001067IPR001294IPR003949IPR011785IPR012129IPR012130IPR012226IPR014285IPR014310IPR014409IPR016384IPR017426
ContainsIPR000700IPR001610
GO termsnone
InterPro
IPR016132
Domain
Phytochrome chromophore attachment domain
PROFILEPS50046PHYTOCHROME_2
 0.0 [255-427]T    
ParentIPR003018
Childrenno children
Found inIPR001294IPR009219IPR012129
ContainsIPR013516
GO termsMolecular Function: G-protein coupled photoreceptor activity (GO:0008020)
Biological Process: protein-chromophore linkage (GO:0018298)
Biological Process: regulation of transcription (GO:0045449)
noIPR
unintegrated
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unintegrated
GENE3DG3DSA:3.30.450.20G3DSA:3.30.450.20
 1.0999999999999999E-26 [661-775]T  4.100000000000014E-25 [804-909]T   
GENE3DG3DSA:3.30.450.40G3DSA:3.30.450.40
 4.500000000000003E-5 [255-379]T    
PANTHERPTHR24423PTHR24423
 1.3999989204987804E-22 [658-1134]T    
SUPERFAMILYSSF55781SSF55781
 2.79999889404114E-9 [255-451]T