InterPro Scan Result: AT4G38680.1

SEQUENCE: AT4G38680.1 CRC64: 9310C89C1BC44F55 LENGTH: 203 aa
InterPro
IPR001878
Domain
Zinc finger, CCHC-type
PF00098[131-145]T 1.9E-5 PF00098 zf-CCHC[184-200]T 8.899999999999985E-5 PF00098 zf-CCHCzf-CCHC
SM00343[130-146]T 1.1000002989614844E-5 SM00343 ZnF_C2HC[184-200]T 2.9000003626990767E-5 SM00343 ZnF_C2HCZnF_C2HC
PS50158[131-146]T 0.0 PS50158 ZF_CCHC[185-200]T 0.0 PS50158 ZF_CCHCZF_CCHC
InterPro
IPR002059
Domain
Cold-shock protein, DNA-binding
PR00050[13-28]T 7.099998842111411E-11 PR00050 COLDSHOCK[34-43]T 7.099998842111411E-11 PR00050 COLDSHOCK[49-67]T 7.099998842111411E-11 PR00050 COLDSHOCKCOLDSHOCK
PF00313[10-76]T 1.7999999999999996E-23 PF00313 CSDCSD
InterPro
IPR011129
Domain
Cold shock protein
SM00357[12-77]T 5.399993844541263E-23 SM00357 CSPCSP
InterPro
IPR012340
Domain
Nucleic acid-binding, OB-fold
G3DSA:2.40.50.140[12-75]T 9.700000000000003E-24 G3DSA:2.40.50.140 OB_NA_bd_subOB_NA_bd_sub
InterPro
IPR013084
Domain
Zinc finger, CCHC retroviral-type
G3DSA:4.10.60.10[125-146]T 6.200000000000001E-14 G3DSA:4.10.60.10 Znf_CCH_retrovir[180-199]T 6.200000000000001E-14 G3DSA:4.10.60.10 Znf_CCH_retrovirZnf_CCH_retrovir
InterPro
IPR016027
Domain
Nucleic acid-binding, OB-fold-like
SSF50249[10-78]T 4.300001706458668E-22 SSF50249 Nucleic_acid_OBNucleic_acid_OB
InterPro
IPR019844
Conserved_site
Cold-shock conserved site
PS00352[24-43]T 0.0 PS00352 COLD_SHOCKCOLD_SHOCK
noIPR
unintegrated
unintegrated
PTHR11544[9-203]T 2.3000044072653393E-37 PTHR11544 PTHR11544PTHR11544
PTHR11544:SF12[9-203]T 2.3000044072653393E-37 PTHR11544:SF12 PTHR11544:SF12PTHR11544:SF12
SEQUENCE: AT4G38680.1 CRC64: 9310C89C1BC44F55 LENGTH: 203 aa
InterPro
IPR001878
Domain
Zinc finger, CCHC-type
PFAMPF00098zf-CCHC
 1.9E-5 [131-145]T  8.899999999999985E-5 [184-200]T   
SMARTSM00343ZnF_C2HC
 1.1000002989614844E-5 [130-146]T  2.9000003626990767E-5 [184-200]T   
PROFILEPS50158ZF_CCHC
 0.0 [131-146]T  0.0 [185-200]T   
Parentno parent
ChildrenIPR013084
Found inIPR016713IPR017151
Containsno entries
GO termsMolecular Function: nucleic acid binding (GO:0003676)
Molecular Function: zinc ion binding (GO:0008270)
InterPro
IPR002059
Domain
Cold-shock protein, DNA-binding
PRINTSPR00050COLDSHOCK
 7.099998842111411E-11 [13-28]T  7.099998842111411E-11 [34-43]T  7.099998842111411E-11 [49-67]T  
PFAMPF00313CSD
 1.7999999999999996E-23 [10-76]T    
ParentIPR011129
Childrenno children
Found inIPR012156IPR012751
ContainsIPR019844
GO termsMolecular Function: DNA binding (GO:0003677)
InterPro
IPR011129
Domain
Cold shock protein
SMARTSM00357CSP
 5.399993844541263E-23 [12-77]T    
Parentno parent
ChildrenIPR002059IPR011113
Found inIPR004476IPR011804IPR011805IPR012340IPR013223
ContainsIPR019844
GO termsMolecular Function: nucleic acid binding (GO:0003676)
InterPro
IPR012340
Domain
Nucleic acid-binding, OB-fold
GENE3DG3DSA:2.40.50.140OB_NA_bd_sub
 9.700000000000003E-24 [12-75]T    
ParentIPR016027
ChildrenIPR001059IPR002547IPR004150IPR011564IPR012309IPR013849IPR020189IPR022666IPR022967
Found inIPR000110IPR000289IPR000424IPR001208IPR001253IPR001884IPR002171IPR002312IPR002313IPR003512IPR004329IPR004522IPR004523IPR004524IPR004591IPR005570IPR005679IPR005680IPR005880IPR006032IPR008045IPR008046IPR008047IPR008048IPR008049IPR008050IPR011344IPR011768IPR011897IPR012156IPR012162IPR012751IPR013846IPR013970IPR014646IPR014647IPR016306IPR016411IPR017075IPR018032IPR020599IPR020780IPR020923
ContainsIPR003871IPR004365IPR007199IPR011129IPR013852IPR013955IPR015365IPR018104IPR018239IPR019844IPR019979
GO termsnone
InterPro
IPR013084
Domain
Zinc finger, CCHC retroviral-type
GENE3DG3DSA:4.10.60.10Znf_CCH_retrovir
 6.200000000000001E-14 [125-146]T  6.200000000000001E-14 [180-199]T   
ParentIPR001878
Childrenno children
Found inno entries
Containsno entries
GO termsMolecular Function: nucleic acid binding (GO:0003676)
Molecular Function: zinc ion binding (GO:0008270)
InterPro
IPR016027
Domain
Nucleic acid-binding, OB-fold-like
SUPERFAMILYSSF50249Nucleic_acid_OB
 4.300001706458668E-22 [10-78]T    
Parentno parent
ChildrenIPR012339IPR012340IPR023113
Found inIPR000110IPR001566IPR001884IPR002312IPR002313IPR003750IPR004523IPR004524IPR004609IPR004665IPR004881IPR006308IPR010874IPR011370IPR011768IPR011897IPR012162IPR014464IPR015525IPR016798IPR017074IPR017084IPR018032IPR020599IPR020780IPR020873IPR020923
ContainsIPR002792IPR003029IPR003871IPR013852IPR015187IPR015188IPR018104IPR018239IPR019844IPR019979
GO termsnone
InterPro
IPR019844
Conserved_site
Cold-shock conserved site
PROSITEPS00352COLD_SHOCK
 0.0 [24-43]T    
Parentno parent
Childrenno children
Found inIPR002059IPR011129IPR012156IPR012340IPR012751IPR016027
Containsno entries
GO termsnone
noIPR
unintegrated
unintegrated
PANTHERPTHR11544PTHR11544
 2.3000044072653393E-37 [9-203]T    
PANTHERPTHR11544:SF12PTHR11544:SF12
 2.3000044072653393E-37 [9-203]T    
Parentno parent
Childrenno children
Found inno entries
Containsno entries
GO termsnone