InterPro Scan Result: AT5G10370.1

SEQUENCE: AT5G10370.1 CRC64: F3EB71C0F11BDD1C LENGTH: 1775 aa
InterPro
IPR001650
Domain
Helicase, C-terminal
PF00271[551-635]T 1.6e-11 PF00271 Helicase_CHelicase_C
SM00490[538-636]T 1.2e-16 SM00490 no descriptionno description
PS51194[510-676]T 15.269 PS51194 HELICASE_CTERHELICASE_CTER
InterPro
IPR001841
Domain
Zinc finger, RING-type
PS50089[1564-1607]T 8.535 PS50089 ZF_RING_2ZF_RING_2
InterPro
IPR002464
Conserved_site
DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site
PS00690[422-431]T NA PS00690 DEAH_ATP_HELICASEDEAH_ATP_HELICASE
InterPro
IPR002867
Domain
Zinc finger, C6HC-type
PF01485[1637-1696]T 2.5e-07 PF01485 IBR[1697-1757]T 3.1e-06 PF01485 IBRIBR
SM00647[1631-1696]T 1.1e-08 SM00647 no description[1697-1760]T 0.065 SM00647 no descriptionno description
InterPro
IPR007087
Domain
Zinc finger, C2H2-type
PS00028[1747-1768]T NA PS00028 ZINC_FINGER_C2H2_1ZINC_FINGER_C2H2_1
InterPro
IPR007502
Domain
Helicase-associated domain
PF04408[697-792]T 3.6e-13 PF04408 HA2HA2
SM00847[696-792]T 3.7e-11 SM00847 no descriptionno description
InterPro
IPR011545
Domain
DNA/RNA helicase, DEAD/DEAH box type, N-terminal
PF00270[311-465]T 2e-07 PF00270 DEADDEAD
InterPro
IPR011709
Domain
Domain of unknown function DUF1605
PF07717[845-937]T 1.4e-10 PF07717 DUF1605DUF1605
InterPro
IPR013083
Domain
Zinc finger, RING/FYVE/PHD-type
G3DSA:3.30.40.10[1561-1595]T 4.9e-05 G3DSA:3.30.40.10 no descriptionno description
InterPro
IPR014001
Domain
DEAD-like helicase
SM00487[304-489]T 1.3e-29 SM00487 no descriptionno description
PS51192[316-480]T 19.066 PS51192 HELICASE_ATP_BIND_1HELICASE_ATP_BIND_1
InterPro
IPR017907
Conserved_site
Zinc finger, RING-type, conserved site
PS00518[1580-1589]T NA PS00518 ZF_RING_1ZF_RING_1
noIPR
unintegrated
unintegrated
coil[231-252]? NA coil coiled-coil[1532-1557]? NA coil coiled-coilcoiled-coil
G3DSA:3.40.50.300[317-462]T 2.3e-32 G3DSA:3.40.50.300 no description[515-650]T 5.6e-16 G3DSA:3.40.50.300 no description[733-834]T 0.00067 G3DSA:3.40.50.300 no descriptionno description
PTHR18934[164-969]T 3e-243 PTHR18934 FAMILY NOT NAMEDFAMILY NOT NAMED
seg[17-34]? NA seg seg[438-447]? NA seg seg[621-634]? NA seg seg[1070-1082]? NA seg seg[1398-1406]? NA seg seg[1633-1645]? NA seg segseg
SSF52540[308-800]T 4.3e-69 SSF52540 P-loop containing nucleoside triphosphate hydrolasesP-loop containing nucleoside triphosphate hydrolases
SSF54791[1389-1478]T 0.00023 SSF54791 Eukaryotic type KH-domain (KH-domain type I)Eukaryotic type KH-domain (KH-domain type I)
SSF57850[1557-1646]T 2.3e-13 SSF57850 RING/U-box[1632-1701]T 1.7e-08 SSF57850 RING/U-box[1702-1773]T 3.1e-14 SSF57850 RING/U-boxRING/U-box
SEQUENCE: AT5G10370.1 CRC64: F3EB71C0F11BDD1C LENGTH: 1775 aa
InterPro
IPR001650
Domain
Helicase, C-terminal
PFAMPF00271Helicase_C
 1.6e-11 [551-635]T    
SMARTSM00490no description
 1.2e-16 [538-636]T    
PROFILEPS51194HELICASE_CTER
 15.269 [510-676]T    
Parentno parent
Childrenno children
Found inIPR000185IPR004576IPR004589IPR004609IPR004807IPR005259IPR006293IPR006474IPR010222IPR010225IPR013444IPR014018IPR014412IPR016438IPR017170IPR017575IPR022307
Containsno entries
GO termsMolecular Function: nucleic acid binding (GO:0003676)
Molecular Function: helicase activity (GO:0004386)
Molecular Function: ATP binding (GO:0005524)
InterPro
IPR001841
Domain
Zinc finger, RING-type
PROFILEPS50089ZF_RING_2
 8.535 [1564-1607]T    
Parentno parent
Childrenno children
Found inIPR001237IPR004162IPR004575IPR004580IPR007954IPR011364IPR012227IPR015458IPR016390IPR016398IPR016495IPR016528IPR016569IPR016818IPR016902IPR017066IPR017335IPR017375IPR018957IPR019162
ContainsIPR017907
GO termsMolecular Function: protein binding (GO:0005515)
Molecular Function: zinc ion binding (GO:0008270)
InterPro
IPR002464
Conserved_site
DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site
PROSITEPS00690DEAH_ATP_HELICASE
 NA [422-431]T    
Parentno parent
Childrenno children
Found inIPR001945IPR006554IPR013020IPR014001
Containsno entries
GO termsMolecular Function: nucleic acid binding (GO:0003676)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: ATP-dependent helicase activity (GO:0008026)
InterPro
IPR002867
Domain
Zinc finger, C6HC-type
PFAMPF01485IBR
 2.5e-07 [1637-1696]T  3.1e-06 [1697-1757]T   
SMARTSM00647no description
 1.1e-08 [1631-1696]T  0.065 [1697-1760]T   
Parentno parent
Childrenno children
Found inIPR003977
Containsno entries
GO termsMolecular Function: zinc ion binding (GO:0008270)
InterPro
IPR007087
Domain
Zinc finger, C2H2-type
PROSITEPS00028ZINC_FINGER_C2H2_1
 NA [1747-1768]T    
ParentIPR015880
Childrenno children
Found inIPR004595IPR007042IPR009170IPR013087IPR016378IPR016608IPR016766IPR017083IPR017085IPR017086IPR017114IPR017124IPR017125IPR017126IPR022755
ContainsIPR015318
GO termsCellular Component: intracellular (GO:0005622)
Molecular Function: zinc ion binding (GO:0008270)
InterPro
IPR007502
Domain
Helicase-associated domain
PFAMPF04408HA2
 3.6e-13 [697-792]T    
SMARTSM00847no description
 3.7e-11 [696-792]T    
Parentno parent
Childrenno children
Found inIPR010222IPR010225
Containsno entries
GO termsMolecular Function: helicase activity (GO:0004386)
InterPro
IPR011545
Domain
DNA/RNA helicase, DEAD/DEAH box type, N-terminal
PFAMPF00270DEAD
 2e-07 [311-465]T    
ParentIPR014001
Childrenno children
Found inIPR004576IPR004589IPR004609IPR005259IPR005736IPR006293IPR016438IPR017170IPR022307
ContainsIPR000629
GO termsMolecular Function: nucleic acid binding (GO:0003676)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: ATP-dependent helicase activity (GO:0008026)
InterPro
IPR011709
Domain
Domain of unknown function DUF1605
PFAMPF07717DUF1605
 1.4e-10 [845-937]T    
Parentno parent
Childrenno children
Found inIPR010222
Containsno entries
GO termsnone
InterPro
IPR013083
Domain
Zinc finger, RING/FYVE/PHD-type
GENE3DG3DSA:3.30.40.10no description
 4.9e-05 [1561-1595]T    
Parentno parent
ChildrenIPR003613IPR011011IPR018957IPR022723
Found inIPR001237IPR002853IPR004575IPR004580IPR012227IPR016390IPR016398IPR016818IPR017335
ContainsIPR001965IPR003315IPR017455IPR017907IPR019786
GO termsnone
InterPro
IPR014001
Domain
DEAD-like helicase
SMARTSM00487no description
 1.3e-29 [304-489]T    
PROFILEPS51192HELICASE_ATP_BIND_1
 19.066 [316-480]T    
Parentno parent
ChildrenIPR006935IPR011492IPR011545
Found inIPR000330IPR003450IPR004473IPR004483IPR004589IPR004807IPR006293IPR006310IPR006474IPR010222IPR010225IPR017548IPR017575IPR022307
ContainsIPR000629IPR002464IPR010614IPR014013
GO termsnone
InterPro
IPR017907
Conserved_site
Zinc finger, RING-type, conserved site
PROSITEPS00518ZF_RING_1
 NA [1580-1589]T    
Parentno parent
Childrenno children
Found inIPR001841IPR004575IPR004580IPR011364IPR012227IPR013083IPR016390IPR016398IPR017335IPR018957
Containsno entries
GO termsnone
noIPR
unintegrated
unintegrated
COILcoilcoiled-coil
 NA [231-252]?  NA [1532-1557]?   
GENE3DG3DSA:3.40.50.300no description
 2.3e-32 [317-462]T  5.6e-16 [515-650]T  0.00067 [733-834]T  
PANTHERPTHR18934FAMILY NOT NAMED
 3e-243 [164-969]T    
SEGsegseg
 NA [17-34]?  NA [438-447]?  NA [621-634]?  NA [1070-1082]? 
 NA [1398-1406]?  NA [1633-1645]?   
SUPERFAMILYSSF52540P-loop containing nucleoside triphosphate hydrolases
 4.3e-69 [308-800]T    
SUPERFAMILYSSF54791Eukaryotic type KH-domain (KH-domain type I)
 0.00023 [1389-1478]T    
SUPERFAMILYSSF57850RING/U-box
 3.1e-14 [1702-1773]T  2.3e-13 [1557-1646]T  1.7e-08 [1632-1701]T  
Parentno parent
Childrenno children
Found inno entries
Containsno entries
GO termsnone