InterPro Scan Result: AT5G35840.1

SEQUENCE: AT5G35840.1 CRC64: 58FE4645501135CA LENGTH: 1111 aa
InterPro
IPR000014
Domain
PAS
SM00091[606-672]T 4.700003266713862E-9 SM00091 PAS[737-806]T 0.1 SM00091 PASPAS
TIGR00229[603-731]T 1.0E-7 TIGR00229 sensory_boxsensory_box
PS50112[604-674]T 0.0 PS50112 PAS[737-793]T 0.0 PS50112 PASPAS
InterPro
IPR001294
Family
Phytochrome
PR01033[128-150]T 2.9999875044570636E-99 PR01033 PHYTOCHROME[228-247]T 2.9999875044570636E-99 PR01033 PHYTOCHROME[313-334]T 2.9999875044570636E-99 PR01033 PHYTOCHROME[423-443]T 2.9999875044570636E-99 PR01033 PHYTOCHROME[508-527]T 2.9999875044570636E-99 PR01033 PHYTOCHROME[540-558]T 2.9999875044570636E-99 PR01033 PHYTOCHROME[607-623]T 2.9999875044570636E-99 PR01033 PHYTOCHROME[626-641]T 2.9999875044570636E-99 PR01033 PHYTOCHROME[699-716]T 2.9999875044570636E-99 PR01033 PHYTOCHROME[719-739]T 2.9999875044570636E-99 PR01033 PHYTOCHROMEPHYTOCHROME
InterPro
IPR001610
Repeat
PAC motif
SM00086[823-865]T 0.0017000001561047378 SM00086 PACPAC
InterPro
IPR003018
Domain
GAF
PF01590[216-390]T 7.100000000000077E-36 PF01590 GAFGAF
SM00065[213-403]T 1.0999990912078717E-9 SM00065 GAFGAF
InterPro
IPR003594
Domain
ATPase-like, ATP-binding domain
G3DSA:3.30.565.10[954-1092]T 1.3999999999999998E-13 G3DSA:3.30.565.10 ATP_bd_ATPaseATP_bd_ATPase
PF02518[994-1096]T 9.600000000000013E-6 PF02518 HATPase_cHATPase_c
SM00387[994-1107]T 2.1000003726265565E-6 SM00387 HATPase_cHATPase_c
SSF55874[949-1106]T 1.0E-11 SSF55874 ATP_bd_ATPaseATP_bd_ATPase
InterPro
IPR003661
Domain
Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
SM00388[883-946]T 5.300000212487095 SM00388 HisKAHisKA
InterPro
IPR005467
Domain
Signal transduction histidine kinase, core
PS50109[889-1111]T 0.0 PS50109 HIS_KINHIS_KIN
InterPro
IPR012129
Family
Phytochrome A/B/C/D/E
PIRSF000084[1-1111]T 0.0 PIRSF000084 PhytochromePhytochrome
InterPro
IPR013515
Domain
Phytochrome, central region
PF00360[404-580]T 5.100000000000042E-63 PF00360 PhytochromePhytochrome
InterPro
IPR013516
Binding_site
Phytochrome chromophore binding site
PS00245[313-322]T 0.0 PS00245 PHYTOCHROME_1PHYTOCHROME_1
InterPro
IPR013654
Domain
PAS fold-2
PF08446[65-180]T 1.9999999999999947E-37 PF08446 PAS_2PAS_2
InterPro
IPR013767
Domain
PAS fold
PF00989[607-721]T 1.9000000000000046E-22 PF00989 PAS[737-860]T 5.800000000000037E-23 PF00989 PASPAS
InterPro
IPR016132
Domain
Phytochrome chromophore attachment domain
PS50046[213-383]T 0.0 PS50046 PHYTOCHROME_2PHYTOCHROME_2
noIPR
unintegrated
unintegrated
G3DSA:3.30.450.20[605-730]T 2.200000000000004E-22 G3DSA:3.30.450.20 G3DSA:3.30.450.20[751-860]T 4.800000000000009E-23 G3DSA:3.30.450.20 G3DSA:3.30.450.20G3DSA:3.30.450.20
SSF55781[213-407]T 4.600000443308617E-7 SSF55781 SSF55781SSF55781
SSF55785[604-717]T 1.499999775833517E-16 SSF55785 SSF55785[751-860]T 1.3999989204987804E-11 SSF55785 SSF55785SSF55785
SEQUENCE: AT5G35840.1 CRC64: 58FE4645501135CA LENGTH: 1111 aa
InterPro
IPR000014
Domain
PAS
SMARTSM00091PAS
 4.700003266713862E-9 [606-672]T  0.1 [737-806]T   
TIGRFAMsTIGR00229sensory_box
 1.0E-7 [603-731]T    
PROFILEPS50112PAS
 0.0 [604-674]T  0.0 [737-793]T   
Parentno parent
ChildrenIPR013655IPR013656IPR013767
Found inIPR001294IPR001321IPR003949IPR003950IPR011785IPR012129IPR012130IPR012226IPR012704IPR014285IPR014310IPR014409IPR015524IPR017181IPR017232
Containsno entries
GO termsMolecular Function: signal transducer activity (GO:0004871)
Biological Process: signal transduction (GO:0007165)
InterPro
IPR001294
Family
Phytochrome
PRINTSPR01033PHYTOCHROME
 2.9999875044570636E-99 [128-150]T  2.9999875044570636E-99 [228-247]T  2.9999875044570636E-99 [313-334]T  2.9999875044570636E-99 [423-443]T 
 2.9999875044570636E-99 [508-527]T  2.9999875044570636E-99 [540-558]T  2.9999875044570636E-99 [607-623]T  2.9999875044570636E-99 [626-641]T 
 2.9999875044570636E-99 [699-716]T  2.9999875044570636E-99 [719-739]T   
Parentno parent
ChildrenIPR009219IPR012129
Found inno entries
ContainsIPR000014IPR003018IPR003594IPR003661IPR013515IPR013516IPR013654IPR013767IPR016132
GO termsMolecular Function: G-protein coupled photoreceptor activity (GO:0008020)
InterPro
IPR001610
Repeat
PAC motif
SMARTSM00086PAC
 0.0017000001561047378 [823-865]T    
Parentno parent
Childrenno children
Found inIPR000700IPR001321IPR003949IPR003950IPR013655IPR013767IPR014285IPR014409IPR015524IPR017181
Containsno entries
GO termsBiological Process: signal transduction (GO:0007165)
InterPro
IPR003018
Domain
GAF
PFAMPF01590GAF
 7.100000000000077E-36 [216-390]T    
SMARTSM00065GAF
 1.0999990912078717E-9 [213-403]T    
Parentno parent
ChildrenIPR016132
Found inIPR001294IPR010113IPR012074IPR012226IPR014265IPR014525
ContainsIPR000614IPR013516
GO termsMolecular Function: protein binding (GO:0005515)
InterPro
IPR003594
Domain
ATPase-like, ATP-binding domain
GENE3DG3DSA:3.30.565.10ATP_bd_ATPase
 1.3999999999999998E-13 [954-1092]T    
PFAMPF02518HATPase_c
 9.600000000000013E-6 [994-1096]T    
SMARTSM00387HATPase_c
 2.1000003726265565E-6 [994-1107]T    
SUPERFAMILYSSF55874ATP_bd_ATPase
 1.0E-11 [949-1106]T    
Parentno parent
ChildrenIPR004358IPR020575
Found inIPR001241IPR001294IPR001404IPR002099IPR005467IPR005734IPR005737IPR005740IPR006290IPR008358IPR010193IPR010194IPR011186IPR011557IPR012129IPR014285IPR014525IPR014763IPR015434IPR015566IPR016380IPR016381IPR016781IPR017171IPR017202IPR017204IPR017205IPR017206IPR020667IPR022510
ContainsIPR014762IPR019805
GO termsMolecular Function: ATP binding (GO:0005524)
InterPro
IPR003661
Domain
Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
SMARTSM00388HisKA
 5.300000212487095 [883-946]T    
ParentIPR009082
Childrenno children
Found inIPR001294IPR005467IPR006290IPR008358IPR012129IPR014265IPR014302IPR014310IPR014409IPR014525IPR017055IPR017116IPR017181IPR017232IPR022510
Containsno entries
GO termsMolecular Function: two-component sensor activity (GO:0000155)
Biological Process: signal transduction (GO:0007165)
Cellular Component: membrane (GO:0016020)
InterPro
IPR005467
Domain
Signal transduction histidine kinase, core
PROFILEPS50109HIS_KIN
 0.0 [889-1111]T    
Parentno parent
Childrenno children
Found inIPR006290IPR008358IPR012129IPR014265IPR014285IPR014302IPR014310IPR014409IPR014525IPR016380IPR016381IPR017055IPR017116IPR017171IPR017181IPR017202IPR017203IPR017204IPR017205IPR017232IPR022510
ContainsIPR003594IPR003661IPR004358IPR011495IPR011712IPR016120
GO termsMolecular Function: two-component sensor activity (GO:0000155)
Molecular Function: protein histidine kinase activity (GO:0004673)
Biological Process: signal transduction (GO:0007165)
Biological Process: peptidyl-histidine phosphorylation (GO:0018106)
InterPro
IPR012129
Family
Phytochrome A/B/C/D/E
PIRPIRSF000084Phytochrome
 0.0 [1-1111]T    
ParentIPR001294
Childrenno children
Found inno entries
ContainsIPR000014IPR003594IPR003661IPR005467IPR013516IPR013654IPR013767IPR016132
GO termsMolecular Function: photoreceptor activity (GO:0009881)
Biological Process: protein-tetrapyrrole linkage (GO:0017006)
Molecular Function: protein homodimerization activity (GO:0042803)
Biological Process: regulation of transcription (GO:0045449)
InterPro
IPR013515
Domain
Phytochrome, central region
PFAMPF00360Phytochrome
 5.100000000000042E-63 [404-580]T    
Parentno parent
Childrenno children
Found inIPR001294
Containsno entries
GO termsMolecular Function: receptor activity (GO:0004872)
Molecular Function: G-protein coupled photoreceptor activity (GO:0008020)
Biological Process: protein-chromophore linkage (GO:0018298)
InterPro
IPR013516
Binding_site
Phytochrome chromophore binding site
PROSITEPS00245PHYTOCHROME_1
 0.0 [313-322]T    
Parentno parent
Childrenno children
Found inIPR001294IPR003018IPR012129IPR016132
Containsno entries
GO termsMolecular Function: G-protein coupled photoreceptor activity (GO:0008020)
Biological Process: protein-chromophore linkage (GO:0018298)
Biological Process: regulation of transcription (GO:0045449)
InterPro
IPR013654
Domain
PAS fold-2
PFAMPF08446PAS_2
 1.9999999999999947E-37 [65-180]T    
Parentno parent
Childrenno children
Found inIPR001294IPR009219IPR012129
Containsno entries
GO termsMolecular Function: G-protein coupled photoreceptor activity (GO:0008020)
Biological Process: protein-chromophore linkage (GO:0018298)
Biological Process: regulation of transcription (GO:0045449)
InterPro
IPR013767
Domain
PAS fold
PFAMPF00989PAS
 1.9000000000000046E-22 [607-721]T  5.800000000000037E-23 [737-860]T   
ParentIPR000014
Childrenno children
Found inIPR001067IPR001294IPR003949IPR011785IPR012129IPR012130IPR012226IPR014285IPR014310IPR014409IPR016384IPR017426
ContainsIPR000700IPR001610
GO termsnone
InterPro
IPR016132
Domain
Phytochrome chromophore attachment domain
PROFILEPS50046PHYTOCHROME_2
 0.0 [213-383]T    
ParentIPR003018
Childrenno children
Found inIPR001294IPR009219IPR012129
ContainsIPR013516
GO termsMolecular Function: G-protein coupled photoreceptor activity (GO:0008020)
Biological Process: protein-chromophore linkage (GO:0018298)
Biological Process: regulation of transcription (GO:0045449)
noIPR
unintegrated
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unintegrated
GENE3DG3DSA:3.30.450.20G3DSA:3.30.450.20
 2.200000000000004E-22 [605-730]T  4.800000000000009E-23 [751-860]T   
SUPERFAMILYSSF55781SSF55781
 4.600000443308617E-7 [213-407]T    
SUPERFAMILYSSF55785SSF55785
 1.499999775833517E-16 [604-717]T  1.3999989204987804E-11 [751-860]T