InterPro Scan Result: AT5G42820.2

SEQUENCE: AT5G42820.2 CRC64: 45407ABBFC1624A5 LENGTH: 283 aa
InterPro
IPR000504
Domain
RNA recognition motif domain
PF00076[83-139]T 0.002300000000000001 PF00076 RRM_1RRM_1
SM00360[67-142]T 4.799997768362738E-5 SM00360 RRMRRM
PS50102[44-146]T 0.0 PS50102 RRMRRM
InterPro
IPR000571
Domain
Zinc finger, CCCH-type
PF00642[14-38]T 2.6000000000000003E-4 PF00642 zf-CCCH[150-173]T 0.15 PF00642 zf-CCCHzf-CCCH
SM00356[13-39]T 0.005799999722625361 SM00356 ZnF_C3H1[148-174]T 0.018000000106278665 SM00356 ZnF_C3H1ZnF_C3H1
PS50103[12-40]T 0.0 PS50103 ZF_C3H1[148-175]T 0.0 PS50103 ZF_C3H1ZF_C3H1
InterPro
IPR009145
Family
U2 auxiliary factor small subunit
PR01848[18-37]T 1.3000049540733013E-64 PR01848 U2AUXFACTOR[37-57]T 1.3000049540733013E-64 PR01848 U2AUXFACTOR[75-90]T 1.3000049540733013E-64 PR01848 U2AUXFACTOR[103-125]T 1.3000049540733013E-64 PR01848 U2AUXFACTOR[130-154]T 1.3000049540733013E-64 PR01848 U2AUXFACTOR[165-177]T 1.3000049540733013E-64 PR01848 U2AUXFACTORU2AUXFACTOR
PTHR12620[1-283]T 0.0 PTHR12620 U2_smallU2_small
InterPro
IPR012677
Domain
Nucleotide-binding, alpha-beta plait
G3DSA:3.30.70.330[44-144]T 1.6000000000000008E-20 G3DSA:3.30.70.330 a_b_plait_nuc_bda_b_plait_nuc_bd
noIPR
unintegrated
unintegrated
G3DSA:4.10.1000.10[149-174]T 1.1E-8 G3DSA:4.10.1000.10 G3DSA:4.10.1000.10G3DSA:4.10.1000.10
SSF54928[30-155]T 1.3999989204987803E-18 SSF54928 SSF54928SSF54928
SEQUENCE: AT5G42820.2 CRC64: 45407ABBFC1624A5 LENGTH: 283 aa
InterPro
IPR000504
Domain
RNA recognition motif domain
PFAMPF00076RRM_1
 0.002300000000000001 [83-139]T    
SMARTSM00360RRM
 4.799997768362738E-5 [67-142]T    
PROFILEPS50102RRM
 0.0 [44-146]T    
Parentno parent
ChildrenIPR003954
Found inIPR002343IPR002344IPR006509IPR006515IPR006529IPR006532IPR006535IPR006536IPR006546IPR006548IPR008111IPR009145IPR011400IPR012677IPR016304IPR016967IPR017111IPR017325IPR017334IPR017347
Containsno entries
GO termsMolecular Function: nucleic acid binding (GO:0003676)
InterPro
IPR000571
Domain
Zinc finger, CCCH-type
PFAMPF00642zf-CCCH
 0.15 [150-173]T  2.6000000000000003E-4 [14-38]T   
SMARTSM00356ZnF_C3H1
 0.018000000106278665 [148-174]T  0.005799999722625361 [13-39]T   
PROFILEPS50103ZF_C3H1
 0.0 [148-175]T  0.0 [12-40]T   
Parentno parent
Childrenno children
Found inIPR009145IPR016401
Containsno entries
GO termsMolecular Function: nucleic acid binding (GO:0003676)
Molecular Function: zinc ion binding (GO:0008270)
InterPro
IPR009145
Family
U2 auxiliary factor small subunit
PRINTSPR01848U2AUXFACTOR
 1.3000049540733013E-64 [165-177]T  1.3000049540733013E-64 [130-154]T  1.3000049540733013E-64 [103-125]T  1.3000049540733013E-64 [75-90]T 
 1.3000049540733013E-64 [37-57]T  1.3000049540733013E-64 [18-37]T   
PANTHERPTHR12620U2_small
 0.0 [1-283]T    
Parentno parent
Childrenno children
Found inno entries
ContainsIPR000504IPR000571
GO termsMolecular Function: RNA binding (GO:0003723)
Cellular Component: nucleus (GO:0005634)
InterPro
IPR012677
Domain
Nucleotide-binding, alpha-beta plait
GENE3DG3DSA:3.30.70.330a_b_plait_nuc_bd
 1.6000000000000008E-20 [44-144]T    
Parentno parent
ChildrenIPR012678IPR014789IPR015245
Found inIPR000427IPR005120IPR006509IPR009021IPR013025IPR016304IPR016967IPR017325IPR017334IPR017347IPR019985
ContainsIPR000504IPR001014IPR014886IPR018098
GO termsMolecular Function: nucleotide binding (GO:0000166)
noIPR
unintegrated
unintegrated
GENE3DG3DSA:4.10.1000.10G3DSA:4.10.1000.10
 1.1E-8 [149-174]T    
SUPERFAMILYSSF54928SSF54928
 1.3999989204987803E-18 [30-155]T    
Parentno parent
Childrenno children
Found inno entries
Containsno entries
GO termsnone