InterPro Scan Result: AT5G60040.2

SEQUENCE: AT5G60040.2 CRC64: B2A240DF657D93C4 LENGTH: 1391 aa
InterPro
IPR000722
Domain
RNA polymerase, alpha subunit
PF00623[369-534]T 2e-69 PF00623 RNA_pol_Rpb1_2RNA_pol_Rpb1_2
InterPro
IPR006592
Domain
RNA polymerase, N-terminal
SM00663[261-563]T 2.3e-163 SM00663 no descriptionno description
InterPro
IPR007066
Domain
RNA polymerase Rpb1, domain 3
PF04983[538-721]T 4e-30 PF04983 RNA_pol_Rpb1_3RNA_pol_Rpb1_3
InterPro
IPR007080
Domain
RNA polymerase Rpb1, domain 1
PF04997[22-367]T 4.2e-66 PF04997 RNA_pol_Rpb1_1RNA_pol_Rpb1_1
InterPro
IPR007081
Domain
RNA polymerase Rpb1, domain 5
PF04998[859-1327]T 9e-97 PF04998 RNA_pol_Rpb1_5RNA_pol_Rpb1_5
InterPro
IPR007083
Domain
RNA polymerase Rpb1, domain 4
PF05000[746-852]T 2e-29 PF05000 RNA_pol_Rpb1_4RNA_pol_Rpb1_4
InterPro
IPR015700
Family
DNA-directed RNA polymerase III largest subunit
PTHR19376:SF15[9-1386]T 0 PTHR19376:SF15 DNA-DIRECTED RNA POLYMERASE III LARGEST SUBUNITDNA-DIRECTED RNA POLYMERASE III LARGEST SUBUNIT
noIPR
unintegrated
unintegrated
PTHR19376[9-1386]T 0 PTHR19376 FAMILY NOT NAMEDFAMILY NOT NAMED
SSF64484[11-1379]T 0 SSF64484 beta and beta-prime subunits of DNA dependent RNA-polymerasebeta and beta-prime subunits of DNA dependent RNA-polymerase
SEQUENCE: AT5G60040.2 CRC64: B2A240DF657D93C4 LENGTH: 1391 aa
InterPro
IPR000722
Domain
RNA polymerase, alpha subunit
PFAMPF00623RNA_pol_Rpb1_2
 2e-69 [369-534]T    
Parentno parent
Childrenno children
Found inIPR006592IPR012754IPR012755IPR012758IPR015699IPR015700
Containsno entries
GO termsMolecular Function: DNA binding (GO:0003677)
Molecular Function: DNA-directed RNA polymerase activity (GO:0003899)
Biological Process: transcription (GO:0006350)
InterPro
IPR006592
Domain
RNA polymerase, N-terminal
SMARTSM00663no description
 2.3e-163 [261-563]T    
Parentno parent
Childrenno children
Found inIPR012754IPR012755IPR012758IPR015699IPR015700
ContainsIPR000722
GO termsMolecular Function: DNA binding (GO:0003677)
Molecular Function: DNA-directed RNA polymerase activity (GO:0003899)
Biological Process: transcription (GO:0006350)
InterPro
IPR007066
Domain
RNA polymerase Rpb1, domain 3
PFAMPF04983RNA_pol_Rpb1_3
 4e-30 [538-721]T    
Parentno parent
Childrenno children
Found inIPR012754IPR012755IPR012756IPR012758IPR015699IPR015700
Containsno entries
GO termsMolecular Function: DNA binding (GO:0003677)
Molecular Function: DNA-directed RNA polymerase activity (GO:0003899)
Biological Process: transcription (GO:0006350)
InterPro
IPR007080
Domain
RNA polymerase Rpb1, domain 1
PFAMPF04997RNA_pol_Rpb1_1
 4.2e-66 [22-367]T    
Parentno parent
Childrenno children
Found inIPR012754IPR012755IPR012758IPR015699IPR015700
Containsno entries
GO termsMolecular Function: DNA binding (GO:0003677)
Molecular Function: DNA-directed RNA polymerase activity (GO:0003899)
Biological Process: transcription (GO:0006350)
InterPro
IPR007081
Domain
RNA polymerase Rpb1, domain 5
PFAMPF04998RNA_pol_Rpb1_5
 9e-97 [859-1327]T    
Parentno parent
Childrenno children
Found inIPR012754IPR012756IPR012757IPR015699IPR015700
ContainsIPR007073IPR007075
GO termsMolecular Function: DNA binding (GO:0003677)
Molecular Function: DNA-directed RNA polymerase activity (GO:0003899)
Biological Process: transcription (GO:0006350)
InterPro
IPR007083
Domain
RNA polymerase Rpb1, domain 4
PFAMPF05000RNA_pol_Rpb1_4
 2e-29 [746-852]T    
Parentno parent
Childrenno children
Found inIPR012754IPR012756IPR012758IPR015699IPR015700
Containsno entries
GO termsMolecular Function: DNA binding (GO:0003677)
Molecular Function: DNA-directed RNA polymerase activity (GO:0003899)
Biological Process: transcription (GO:0006350)
InterPro
IPR015700
Family
DNA-directed RNA polymerase III largest subunit
PANTHERPTHR19376:SF15DNA-DIRECTED RNA POLYMERASE III LARGEST SUBUNIT
 0 [9-1386]T    
Parentno parent
Childrenno children
Found inno entries
ContainsIPR000722IPR006592IPR007066IPR007080IPR007081IPR007083
GO termsMolecular Function: DNA-directed RNA polymerase activity (GO:0003899)
Cellular Component: nucleus (GO:0005634)
Biological Process: transcription (GO:0006350)
Molecular Function: zinc ion binding (GO:0008270)
Molecular Function: ribonucleoside binding (GO:0032549)
noIPR
unintegrated
unintegrated
PANTHERPTHR19376FAMILY NOT NAMED
 0 [9-1386]T    
SUPERFAMILYSSF64484beta and beta-prime subunits of DNA dependent RNA-polymerase
 0 [11-1379]T    
Parentno parent
Childrenno children
Found inno entries
Containsno entries
GO termsnone