InterPro Scan Result: J013000D04

SEQUENCE: Sequence_1_1_ORF1 CRC64: DDA2129FA3C87344 LENGTH: 519 aa
InterPro
IPR000116
Family
High mobility group, HMG-I/HMG-Y
PR00930[363-375]T 5.9e-06 PR00930 HIGHMOBLTYIY[391-402]T 5.9e-06 PR00930 HIGHMOBLTYIY[406-425]T 5.9e-06 PR00930 HIGHMOBLTYIYHIGHMOBLTYIY
InterPro
IPR005818
Domain
Histone H1/H5
PF00538[22-80]T 2.9e-08 PF00538 Linker_histoneLinker_histone
SM00526[19-85]T 3e-21 SM00526 no descriptionno description
InterPro
IPR011991
Domain
Winged helix-turn-helix transcription repressor DNA-binding
G3DSA:1.10.10.10[16-101]T 2.6e-08 G3DSA:1.10.10.10 no descriptionno description
InterPro
IPR017956
Conserved_site
AT hook, DNA-binding motif
SM00384[97-109]T 0.96 SM00384 no description[115-127]T 2.3 SM00384 no description[136-148]T 48 SM00384 no description[168-180]T 2.1 SM00384 no description[188-200]T 1.1 SM00384 no description[208-220]T 2.1 SM00384 no description[234-246]T 0.8 SM00384 no description[259-271]T 2.4 SM00384 no description[287-299]T 0.56 SM00384 no description[313-325]T 20 SM00384 no description[389-401]T 2.9 SM00384 no description[417-429]T 1.2 SM00384 no descriptionno description
InterPro
IPR020478
Region
A.T hook-like
PR00929[287-297]T 3.2e-11 PR00929 ATHOOK[387-398]T 3.2e-11 PR00929 ATHOOK[415-425]T 3.2e-11 PR00929 ATHOOKATHOOK
noIPR
unintegrated
unintegrated
PTHR11467[7-54]T 0.00014 PTHR11467 HISTONE H1/H5HISTONE H1/H5
seg[3-19]? NA seg seg[89-123]? NA seg seg[150-165]? NA seg seg[218-232]? NA seg seg[283-299]? NA seg seg[313-324]? NA seg seg[388-397]? NA seg segseg
SSF46785[17-103]T 3e-17 SSF46785 "Winged helix" DNA-binding domain
SEQUENCE: Sequence_1_2_ORF2 CRC64: 940B306FA59CEF19 LENGTH: 134 aa
noIPR
unintegrated
unintegrated
seg[11-39]? NA seg seg[61-66]? NA seg seg[75-86]? NA seg seg[118-132]? NA seg segseg
SEQUENCE: Sequence_1_2_ORF3 CRC64: 285CA296C9E64DA8 LENGTH: 130 aa
No hits reported.
SEQUENCE: Sequence_1_3_ORF1 CRC64: 22556D27618BC948 LENGTH: 132 aa
noIPR
unintegrated
unintegrated
seg[11-22]? NA seg seg[56-79]? NA seg seg[87-102]? NA seg segseg
SEQUENCE: Sequence_1_3_ORF2 CRC64: 364DFD7C8FDD7BEE LENGTH: 73 aa
noIPR
unintegrated
unintegrated
seg[20-26]? NA seg segseg
SEQUENCE: Sequence_1_3_ORF3 CRC64: 30C3B36726A419CA LENGTH: 85 aa
noIPR
unintegrated
unintegrated
seg[6-24]? NA seg segseg
SEQUENCE: Sequence_1_3_ORF4 CRC64: 77FA455F52654508 LENGTH: 62 aa
noIPR
unintegrated
unintegrated
seg[18-42]? NA seg segseg
SEQUENCE: Sequence_1_4_ORF2 CRC64: D117EA13B238A9F1 LENGTH: 71 aa
No hits reported.
SEQUENCE: Sequence_1_4_ORF3 CRC64: 8C5EEC356AA41986 LENGTH: 86 aa
noIPR
unintegrated
unintegrated
seg[38-50]? NA seg segseg
SEQUENCE: Sequence_1_4_ORF4 CRC64: 8A2A6AD32989C764 LENGTH: 171 aa
noIPR
unintegrated
unintegrated
seg[16-29]? NA seg seg[53-69]? NA seg seg[85-97]? NA seg seg[124-158]? NA seg segseg
SEQUENCE: Sequence_1_4_ORF5 CRC64: 42EE4526A8D14B0E LENGTH: 66 aa
noIPR
unintegrated
unintegrated
seg[2-23]? NA seg seg[50-66]? NA seg segseg
SEQUENCE: Sequence_1_5_ORF2 CRC64: DC0F32E8F75D20D1 LENGTH: 91 aa
No hits reported.
SEQUENCE: Sequence_1_5_ORF3 CRC64: 494D614D8DBDB2AC LENGTH: 79 aa
noIPR
unintegrated
unintegrated
seg[1-7]? NA seg segseg
SEQUENCE: Sequence_1_6_ORF2 CRC64: C4D98AD29F10FD03 LENGTH: 76 aa
No hits reported.
SEQUENCE: Sequence_1_6_ORF3 CRC64: 75FBB41A0FCAF396 LENGTH: 82 aa
No hits reported.
SEQUENCE: Sequence_1_6_ORF4 CRC64: 6E9F87EAF386433D LENGTH: 232 aa
noIPR
unintegrated
unintegrated
seg[23-34]? NA seg seg[115-129]? NA seg seg[185-197]? NA seg seg[199-211]? NA seg segseg
Creative Commons License RIKEN Center for Sustainable Resource Science
Contact: RARGE developers <>
  • RIKEN
  • Plant Science Center
  • Center for Sustainable Resource Science